Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
About & FAQ
Top 50
Original data
Interesting meta-analysis

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for CG30077-RA through 18771 annotations produced 1 hits

BLOC-1 subunit 1 (blos1):

Annotation Number : CG30077
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050077
Gbrowse : chr2R:10488859-10489349 (+) // 100.0 //
Probeset : 1630798_at
Accessions : protein= NP_725401;, nucleotide= NM_166060;
FlyMine data for FBgn0050077.
BioGrid reports that CG30077 interacts with CG32031 CG3548 CG4363 CG4832 CG5026 CG5450 CG5907 CG7437 CG8831 .
VDRC has 3 RNAi stocks for FBgn0050077 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain209 74 of 4 2.90Up
Head119 24 of 4 1.70Up
Eye221 114 of 4 3.09Up
Thoracicoabdominal ganglion189 74 of 4 2.60Up
Salivary gland129 64 of 4 1.80Up
Crop126 104 of 4 1.80Up
Midgut137 64 of 4 1.90Up
Tubule84 24 of 4 1.20Up
Hindgut115 64 of 4 1.60Up
Heart113 34 of 4 1.59Up
Fat body63 54 of 4 0.89None
Ovary98 14 of 4 1.40Up
Testis24 24 of 4 0.30Down
Male accessory glands109 44 of 4 1.50Up
Virgin spermatheca95 14 of 4 1.32Up
Mated spermatheca95 04 of 4 1.33Up
Adult carcass78 34 of 4 1.10None
Larval CNS115 74 of 4 1.61Up
Larval Salivary gland91 64 of 4 1.28None
Larval midgut70 54 of 4 0.99None
Larval tubule106 44 of 4 1.50Up
Larval hindgut79 24 of 4 1.11Up
Larval fat body86 114 of 4 1.20None
Larval trachea123 54 of 4 1.72Up
Larval carcass73 74 of 4 1.02None
S2 cells (growing)118 44 of 4 1.65Up
Whole fly71 14 of 4

Looking for CG30077-RA. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime