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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG30281-RA through 18771 annotations produced 1 hits



Fibrinogen-related protein (CG30281):

Annotation Number : CG30281
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050281
Gbrowse : chr2R:18002501-18003695 (+) // 100.0 //
Probeset : 1634192_at
Accessions : protein= NP_726164;, nucleotide= NM_166512;
Pathway : 0005615 // extracellular space // inferred from electronic annotation
Interpro : 0005102 // receptor binding // inferred from electronic annotation
FlyMine data for FBgn0050281.
BDGP gene expression has embryonic in situ data for CG30281: 8 pix of staining in 1 body parts.
Homophila reports that CG30281 is a close match (1e-28) to human gene FGG (NP_068656), a gene associated with Dysfibrinogenemia, gamma type (3);Hypofibrinogenemia, gamma type (3);Thrombophilia, dysfibrinogenemic (3).
VDRC has 1 RNAi stocks for FBgn0050281 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.40Down
Head5 ± 11 of 4 0.50None
Eye12 ± 24 of 4 1.32None
Thoracicoabdominal ganglion0 ± 00 of 4 0.10Down
Salivary gland8 ± 30 of 4 0.81None
Crop9 ± 14 of 4 0.90None
Midgut1 ± 00 of 4 0.20Down
Tubule6 ± 01 of 4 0.70Down
Hindgut9 ± 12 of 4 1.00None
Heart122 ± 34 of 412.41Up
Fat body192 ± 394 of 419.51Up
Ovary1 ± 10 of 4 0.20Down
Testis1 ± 00 of 4 0.20Down
Male accessory glands8 ± 21 of 4 0.90None
Virgin spermatheca166 ± 44 of 416.85Up
Mated spermatheca195 ± 174 of 419.80Up
Adult carcass88 ± 64 of 4 9.00Up
Larval CNS4 ± 21 of 4 0.48Down
Larval Salivary gland12 ± 13 of 4 1.23None
Larval midgut6 ± 01 of 4 0.66None
Larval tubule2 ± 10 of 4 0.30Down
Larval hindgut5 ± 02 of 4 0.56Down
Larval fat body5 ± 00 of 4 0.50Down
Larval trachea8 ± 13 of 4 0.87None
Larval carcass6 ± 02 of 4 0.70None
S2 cells (growing)3 ± 13 of 4 0.36Down
Whole fly9 ± 14 of 4

Looking for CG30281-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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