Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG30285-RA through 18771 annotations produced 1 hits



/// fizzy-related (CG30285 /// rap):

Annotation Number : CG30285
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050285
Gbrowse : chr2R:17575407-17576026 (-) // 100.0 //
Probeset : 1635223_at
Accessions : protein= NP_524852; /// NP_726103; /// NP_726941;, nucleotide= NM_080113; /// NM_166473; /// NM_167013;
Pathway : 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005819 /
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0050285.
VDRC has 1 RNAi stocks for FBgn0050285 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain430 134 of 4 5.30Up
Head572 444 of 4 7.10Up
Eye481 204 of 4 5.98Up
Thoracicoabdominal ganglion585 374 of 4 7.30Up
Salivary gland250 154 of 4 3.10Up
Crop321 104 of 4 4.00Up
Midgut30 33 of 4 0.40Down
Tubule13 22 of 4 0.20Down
Hindgut922 524 of 411.40Up
Heart230 74 of 4 2.86Up
Fat body37 44 of 4 0.46Down
Ovary4 10 of 4 0.00Down
Testis27 14 of 4 0.30Down
Male accessory glands32 34 of 4 0.40Down
Virgin spermatheca104 44 of 4 1.29None
Mated spermatheca161 164 of 4 2.00Up
Adult carcass304 184 of 4 3.80Up
Larval CNS87 124 of 4 1.09None
Larval Salivary gland4 10 of 4 0.06Down
Larval midgut12 21 of 4 0.15Down
Larval tubule5 10 of 4 0.10Down
Larval hindgut82 124 of 4 1.03None
Larval fat body21 13 of 4 0.30Down
Larval trachea337 734 of 4 4.19Up
Larval carcass47 74 of 4 0.59Down
S2 cells (growing)15 23 of 4 0.19Down
Whole fly80 84 of 4

Looking for CG30285-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime