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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG30364-RA through 18771 annotations produced 1 hits



hug-bell /// spacewatch (hubl /// spaw):

Annotation Number : CG30364
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050364
Gbrowse : chr2R:4248727-4249661 (-) // 100.0 //
Probeset : 1641544_at
Accessions : protein= NP_724671;, nucleotide= NM_165603;
FlyMine data for FBgn0050364.
VDRC has 1 RNAi stocks for FBgn0050364 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10Down
Head3 ± 10 of 4 0.20Down
Eye0 ± 00 of 4 0.05Down
Thoracicoabdominal ganglion1 ± 10 of 4 0.10Down
Salivary gland6 ± 30 of 4 0.42None
Crop1 ± 10 of 4 0.10Down
Midgut2 ± 10 of 4 0.10Down
Tubule3 ± 00 of 4 0.20Down
Hindgut1 ± 00 of 4 0.10Down
Heart4 ± 10 of 4 0.26Down
Fat body4 ± 00 of 4 0.32Down
Ovary0 ± 00 of 4 0.00Down
Testis111 ± 94 of 4 7.10Up
Male accessory glands2 ± 00 of 4 0.10Down
Virgin spermatheca2 ± 10 of 4 0.16Down
Mated spermatheca1 ± 00 of 4 0.11Down
Adult carcass4 ± 10 of 4 0.30Down
Larval CNS1 ± 10 of 4 0.11Down
Larval Salivary gland6 ± 10 of 4 0.44Down
Larval midgut1 ± 00 of 4 0.09Down
Larval tubule0 ± 00 of 4 0.10Down
Larval hindgut1 ± 10 of 4 0.12Down
Larval fat body17 ± 51 of 4 1.10None
Larval trachea1 ± 10 of 4 0.13Down
Larval carcass0 ± 00 of 4 0.06Down
S2 cells (growing)0 ± 00 of 4 0.04Down
Whole fly15 ± 12 of 4

Looking for CG30364-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime