FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG30365-RA through 18771 annotations produced 1 hits

spacewatch (spaw):

Annotation Number : CG30365
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050365
Gbrowse : chr2R:4246452-4248695 (-) // 100.0 //
Probeset : 1637744_at
Accessions : protein= NP_724670;, nucleotide= NM_165602;
FlyMine data for FBgn0050365.
VDRC has 1 RNAi stocks for FBgn0050365 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.40	None
Head	2 ± 1	0 of 4	0.70	None
Eye	2 ± 0	0 of 4	0.87	None
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.70	None
Salivary gland	3 ± 0	0 of 4	0.88	None
Crop	1 ± 0	0 of 4	0.40	None
Midgut	1 ± 1	0 of 4	0.50	None
Tubule	2 ± 0	0 of 4	0.70	Down
Hindgut	1 ± 0	0 of 4	0.50	None
Heart	1 ± 0	0 of 4	0.44	None
Fat body	1 ± 0	0 of 4	0.35	None
Ovary	0 ± 0	0 of 4	0.10	None
Testis	7 ± 1	1 of 4	2.30	None
Male accessory glands	1 ± 0	0 of 4	0.30	None
Virgin spermatheca	1 ± 0	0 of 4	0.51	None
Mated spermatheca	2 ± 1	0 of 4	0.73	None
Adult carcass	1 ± 0	0 of 4	0.50	None
Larval CNS	0 ± 0	0 of 4	0.13	None
Larval Salivary gland	5 ± 1	0 of 4	1.46	None
Larval midgut	0 ± 0	0 of 4	0.13	None
Larval tubule	2 ± 1	0 of 4	0.80	None
Larval hindgut	1 ± 0	0 of 4	0.47	None
Larval fat body	7 ± 1	0 of 4	2.10	None
Larval trachea	0 ± 0	0 of 4	0.24	None
Larval carcass	1 ± 0	0 of 4	0.36	None
S2 cells (growing)	1 ± 0	0 of 4	0.44	None
Whole fly	3 ± 1	0 of 4

Looking for CG30365-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720