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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG30421-RA through 18771 annotations produced 1 hits



/// GA15834 (CG30421 /// DpseGA15834):

Annotation Number : CG30421
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050421
Gbrowse : chr2R:20631334-20644501 (+) // 100.0 //
Probeset : 1639770_at
Accessions : protein= NP_611959;, nucleotide= NM_138115;
Interpro : 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0008233 // peptidase activity //
FlyMine data for FBgn0050421.
VDRC has 3 RNAi stocks for FBgn0050421 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain402 ± 224 of 4 3.50Up
Head201 ± 124 of 4 1.70Up
Eye120 ± 44 of 4 1.04None
Thoracicoabdominal ganglion473 ± 134 of 4 4.10Up
Salivary gland583 ± 164 of 4 5.02Up
Crop122 ± 24 of 4 1.10None
Midgut117 ± 04 of 4 1.00None
Tubule323 ± 144 of 4 2.80Up
Hindgut124 ± 54 of 4 1.10None
Heart76 ± 84 of 4 0.66Down
Fat body101 ± 204 of 4 0.87None
Ovary230 ± 64 of 4 2.00Up
Testis27 ± 24 of 4 0.20Down
Male accessory glands175 ± 74 of 4 1.50Up
Virgin spermatheca120 ± 164 of 4 1.04None
Mated spermatheca140 ± 174 of 4 1.21None
Adult carcass82 ± 44 of 4 0.70Down
Larval CNS415 ± 504 of 4 3.58Up
Larval Salivary gland328 ± 134 of 4 2.83Up
Larval midgut92 ± 64 of 4 0.79None
Larval tubule162 ± 74 of 4 1.40Up
Larval hindgut139 ± 34 of 4 1.20None
Larval fat body59 ± 34 of 4 0.50Down
Larval trachea86 ± 64 of 4 0.74Down
Larval carcass77 ± 54 of 4 0.67Down
S2 cells (growing)192 ± 44 of 4 1.65Up
Whole fly116 ± 84 of 4

Looking for CG30421-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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