FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3061-RA through 18771 annotations produced 1 hits

dnaJ like2 (CG3061):

Annotation Number : CG3061
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038195
Gbrowse : chr3R:9858088-9860764 (+) // 100.0 //
Probeset : 1636708_at
Accessions : protein= NP_650328;, nucleotide= NM_142071;
Interpro : 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding //
FlyMine data for FBgn0038195.
BDGP gene expression has embryonic in situ data for CG3061: 8 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0038195 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	910 ± 17	4 of 4	2.00	Up
Head	843 ± 31	4 of 4	1.80	Up
Eye	1960 ± 139	4 of 4	4.20	Up
Thoracicoabdominal ganglion	1115 ± 22	4 of 4	2.40	Up
Salivary gland	1791 ± 71	4 of 4	3.84	Up
Crop	922 ± 17	4 of 4	2.00	Up
Midgut	553 ± 23	4 of 4	1.20	None
Tubule	1015 ± 27	4 of 4	2.20	Up
Hindgut	906 ± 21	4 of 4	1.90	Up
Heart	1148 ± 36	4 of 4	2.46	Up
Fat body	1231 ± 91	4 of 4	2.64	Up
Ovary	470 ± 12	4 of 4	1.00	None
Testis	315 ± 9	4 of 4	0.70	Down
Male accessory glands	1264 ± 71	4 of 4	2.70	Up
Virgin spermatheca	942 ± 12	4 of 4	2.02	Up
Mated spermatheca	1006 ± 33	4 of 4	2.16	Up
Adult carcass	706 ± 22	4 of 4	1.50	Up
Larval CNS	684 ± 23	4 of 4	1.47	Up
Larval Salivary gland	1509 ± 35	4 of 4	3.24	Up
Larval midgut	692 ± 20	4 of 4	1.49	Up
Larval tubule	867 ± 25	4 of 4	1.90	Up
Larval hindgut	764 ± 22	4 of 4	1.64	Up
Larval fat body	436 ± 13	4 of 4	0.90	None
Larval trachea	544 ± 41	4 of 4	1.17	None
Larval carcass	726 ± 13	4 of 4	1.56	Up
S2 cells (growing)	1045 ± 7	4 of 4	2.24	Up
Whole fly	466 ± 27	4 of 4

Looking for CG3061-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720