FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3093-RA through 18771 annotations produced 1 hits

deep orange (dor):

Annotation Number : CG3093
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000482
Gbrowse : chrX:1559087-1562487 (+) // 100.0 //
Probeset : 1623139_at
Accessions : protein= NP_477286;, nucleotide= NM_057938;
Pathway : 0005764 // lysosome // inferred from direct assay /// 0005764 // lysosome // inferred from electronic annotation /// 000
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0005515 // protein binding // inferred from electro
FlyMine data for FBgn0000482.
BDGP gene expression has embryonic in situ data for dor: 4 pix of staining in 1 body parts.
BioGrid reports that CG3093 interacts with CG4889 CG12230 CG12230 .
VDRC has 3 RNAi stocks for FBgn0000482 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	63 ± 2	4 of 4	1.70	Up
Head	39 ± 3	4 of 4	1.10	None
Eye	60 ± 4	4 of 4	1.61	Up
Thoracicoabdominal ganglion	55 ± 3	4 of 4	1.50	Up
Salivary gland	109 ± 7	4 of 4	2.94	Up
Crop	53 ± 1	4 of 4	1.40	Up
Midgut	46 ± 3	4 of 4	1.30	None
Tubule	43 ± 2	4 of 4	1.20	Up
Hindgut	49 ± 3	4 of 4	1.30	None
Heart	62 ± 5	4 of 4	1.66	Up
Fat body	31 ± 2	3 of 4	0.83	None
Ovary	57 ± 1	4 of 4	1.50	Up
Testis	11 ± 2	3 of 4	0.30	Down
Male accessory glands	107 ± 8	4 of 4	2.90	Up
Virgin spermatheca	33 ± 5	4 of 4	0.89	None
Mated spermatheca	36 ± 1	4 of 4	0.97	None
Adult carcass	29 ± 4	1 of 4	0.80	None
Larval CNS	99 ± 6	4 of 4	2.67	Up
Larval Salivary gland	145 ± 13	4 of 4	3.89	Up
Larval midgut	51 ± 2	4 of 4	1.38	Up
Larval tubule	91 ± 6	4 of 4	2.40	Up
Larval hindgut	45 ± 4	4 of 4	1.22	None
Larval fat body	62 ± 5	4 of 4	1.70	Up
Larval trachea	68 ± 6	4 of 4	1.84	Up
Larval carcass	47 ± 3	2 of 4	1.28	None
S2 cells (growing)	102 ± 5	4 of 4	2.75	Up
Whole fly	37 ± 3	4 of 4

Looking for CG3093-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720