FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31004-RA through 18771 annotations produced 1 hits

(CG31004):

Annotation Number : CG31004
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051004
Gbrowse : chr3R:27005304-27021484 (-) // 100.0 //
Probeset : 1625278_s_at
Accessions : protein= NP_001163781; /// NP_001163782; /// NP_733418; /// NP_733419;, nucleotide= NM_001170310; /// NM_001170311; /// NM_170539; /// NM_170540;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0051004.
BDGP gene expression has embryonic in situ data for CG31004: 13 pix of staining in 3 body parts.
Homophila reports that CG31004 is a close match (4e-17) to human gene DFNA12;DFNA8;DFNB21;TECTA (NP_005413), a gene associated with Deafness, autosomal dominant 8/12, 601543 (3);Deafness, autosomal recessive 21, 603629 (3).
VDRC has 3 RNAi stocks for FBgn0051004 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.00	Down
Head	2 ± 1	0 of 4	0.00	Down
Eye	1 ± 1	0 of 4	0.01	Down
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.00	Down
Salivary gland	2 ± 0	0 of 4	0.01	Down
Crop	5 ± 1	0 of 4	0.00	Down
Midgut	1679 ± 62	4 of 4	8.70	Up
Tubule	434 ± 20	4 of 4	2.20	Up
Hindgut	590 ± 11	4 of 4	3.10	Up
Heart	1 ± 0	0 of 4	0.01	Down
Fat body	4 ± 7	0 of 4	0.02	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	32 ± 3	4 of 4	0.20	Down
Male accessory glands	23 ± 4	1 of 4	0.10	Down
Virgin spermatheca	67 ± 6	4 of 4	0.35	Down
Mated spermatheca	146 ± 36	4 of 4	0.76	None
Adult carcass	2 ± 0	0 of 4	0.00	Down
Larval CNS	2 ± 2	0 of 4	0.01	Down
Larval Salivary gland	1 ± 0	0 of 4	0.01	Down
Larval midgut	1576 ± 108	4 of 4	8.16	Up
Larval tubule	746 ± 30	4 of 4	3.90	Up
Larval hindgut	692 ± 31	4 of 4	3.59	Up
Larval fat body	7 ± 3	0 of 4	0.00	Down
Larval trachea	2 ± 2	0 of 4	0.01	Down
Larval carcass	1 ± 0	0 of 4	0.01	Down
S2 cells (growing)	2 ± 0	0 of 4	0.01	Down
Whole fly	193 ± 14	4 of 4

Looking for CG31004-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720