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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG31110-RA through 18771 annotations produced 1 hits



5PtaseI (5PtaseI):

Annotation Number : CG31110
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259178
Gbrowse : chr3R:20866148-20870857 (-) // 100.0 //
Probeset : 1638509_at
Accessions : protein= NP_001138108; /// NP_001138109; /// NP_733069;, nucleotide= NM_001144636; /// NM_001144637; /// NM_170190;
Interpro : 0004437 // inositol or phosphatidylinositol phosphatase activity // inferred from electronic annotation /// 0004445 // i
FlyMine data for FBgn0259178.
TRiP has 1 RNAi stocks for FBgn0259178 available for purchase.
VDRC has 4 RNAi stocks for FBgn0259178 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain314 64 of 4 8.10Up
Head160 84 of 4 4.20Up
Eye449 184 of 411.64Up
Thoracicoabdominal ganglion225 44 of 4 5.80Up
Salivary gland4 00 of 4 0.12Down
Crop29 41 of 4 0.80None
Midgut5 20 of 4 0.10Down
Tubule6 10 of 4 0.20Down
Hindgut21 32 of 4 0.60Down
Heart14 21 of 4 0.38Down
Fat body5 30 of 4 0.13Down
Ovary87 24 of 4 2.30Up
Testis7 00 of 4 0.20Down
Male accessory glands12 20 of 4 0.30Down
Virgin spermatheca5 20 of 4 0.15Down
Mated spermatheca9 00 of 4 0.24Down
Adult carcass31 22 of 4 0.80Down
Larval CNS152 74 of 4 3.94Up
Larval Salivary gland6 20 of 4 0.16Down
Larval midgut4 20 of 4 0.13Down
Larval tubule2 00 of 4 0.10Down
Larval hindgut11 00 of 4 0.29Down
Larval fat body1 00 of 4 0.00Down
Larval trachea23 132 of 4 0.61None
Larval carcass22 21 of 4 0.59Down
S2 cells (growing)18 10 of 4 0.47Down
Whole fly38 14 of 4

Looking for CG31110-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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