FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31193-RA through 18771 annotations produced 1 hits

Turandot X (TotX):

Annotation Number : CG31193
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0044810
Gbrowse : chr3R:16730637-16731240 (-) // 100.0 //
Probeset : 1625164_at
Accessions : protein= NP_536781;, nucleotide= NM_080520;
Pathway : 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred fr
FlyMine data for FBgn0044810.
VDRC has 1 RNAi stocks for FBgn0044810 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	21 ± 5	4 of 4	0.20	Down
Head	995 ± 94	4 of 4	7.10	Up
Eye	806 ± 213	4 of 4	5.73	None
Thoracicoabdominal ganglion	21 ± 3	4 of 4	0.20	Down
Salivary gland	13 ± 2	2 of 4	0.10	Down
Crop	13 ± 1	3 of 4	0.10	Down
Midgut	5 ± 0	0 of 4	0.00	Down
Tubule	16 ± 5	2 of 4	0.10	Down
Hindgut	21 ± 3	4 of 4	0.20	Down
Heart	907 ± 281	4 of 4	6.45	None
Fat body	2551 ± 365	4 of 4	18.13	Up
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	2 ± 0	0 of 4	0.00	Down
Male accessory glands	6 ± 1	0 of 4	0.00	Down
Virgin spermatheca	859 ± 363	4 of 4	6.11	None
Mated spermatheca	756 ± 292	4 of 4	5.37	None
Adult carcass	501 ± 51	4 of 4	3.60	Up
Larval CNS	1 ± 1	1 of 4	0.01	Down
Larval Salivary gland	5 ± 1	0 of 4	0.04	Down
Larval midgut	5 ± 0	0 of 4	0.04	Down
Larval tubule	1 ± 0	0 of 4	0.00	Down
Larval hindgut	3 ± 0	0 of 4	0.03	Down
Larval fat body	5 ± 1	0 of 4	0.00	Down
Larval trachea	16 ± 28	1 of 4	0.12	Down
Larval carcass	2 ± 0	0 of 4	0.02	Down
S2 cells (growing)	3 ± 1	1 of 4	0.02	Down
Whole fly	140 ± 21	4 of 4

Looking for CG31193-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720