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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG31216-RA through 18771 annotations produced 1 hits



nicotinamide amidase (Naam):

Annotation Number : CG31216
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051216
Gbrowse : chr3R:15497182-15524272 (+) // 100.0 //
Probeset : 1640214_at
Accessions : protein= NP_732446;, nucleotide= NM_169872;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from
FlyMine data for FBgn0051216.
BDGP gene expression has embryonic in situ data for CG31216: 28 pix of staining in 6 body parts.
VDRC has 2 RNAi stocks for FBgn0051216 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain38 14 of 4 0.70Down
Head198 124 of 4 3.60Up
Eye34 64 of 4 0.62Down
Thoracicoabdominal ganglion83 34 of 4 1.50Up
Salivary gland9 30 of 4 0.16Down
Crop19 20 of 4 0.30Down
Midgut32 22 of 4 0.60Down
Tubule3 10 of 4 0.10Down
Hindgut71 44 of 4 1.30Up
Heart13 12 of 4 0.24Down
Fat body20 22 of 4 0.37Down
Ovary68 34 of 4 1.20None
Testis11 10 of 4 0.20Down
Male accessory glands19 00 of 4 0.40Down
Virgin spermatheca23 13 of 4 0.41Down
Mated spermatheca26 32 of 4 0.48Down
Adult carcass90 54 of 4 1.60Up
Larval CNS42 24 of 4 0.76None
Larval Salivary gland11 20 of 4 0.20Down
Larval midgut11 10 of 4 0.20Down
Larval tubule1 00 of 4 0.00Down
Larval hindgut18 41 of 4 0.33Down
Larval fat body9 30 of 4 0.20Down
Larval trachea22 44 of 4 0.41Down
Larval carcass37 41 of 4 0.68Down
S2 cells (growing)256 94 of 4 4.60Up
Whole fly55 44 of 4

Looking for CG31216-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime