FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31218-RA through 18771 annotations produced 1 hits

CG17793 (CG34402):

Annotation Number : CG31218
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085431
Gbrowse : chr3R:8214520-8216356 (+) // 100.0 //
Probeset : 1625575_at
Accessions : protein= NP_001097756; /// NP_001097757; /// NP_001097758;, nucleotide= NM_001104286; /// NM_001104287; /// NM_001104288;
FlyMine data for FBgn0085431.
TRiP has 1 RNAi stocks for FBgn0085431 available for purchase.
VDRC has 6 RNAi stocks for FBgn0085431 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 0	4 of 4	7.60	Up
Head	6 ± 0	0 of 4	3.30	Up
Eye	3 ± 0	0 of 4	1.72	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	2.00	None
Salivary gland	6 ± 2	0 of 4	3.27	None
Crop	1 ± 0	0 of 4	1.00	None
Midgut	5 ± 1	0 of 4	2.90	None
Tubule	2 ± 0	0 of 4	1.30	None
Hindgut	8 ± 2	0 of 4	4.30	None
Heart	3 ± 0	0 of 4	1.62	None
Fat body	4 ± 3	0 of 4	2.65	None
Ovary	1 ± 0	0 of 4	0.60	None
Testis	2 ± 0	0 of 4	1.10	None
Male accessory glands	2 ± 0	0 of 4	1.20	None
Virgin spermatheca	2 ± 1	0 of 4	1.47	None
Mated spermatheca	3 ± 1	0 of 4	1.84	None
Adult carcass	8 ± 2	0 of 4	4.70	None
Larval CNS	9 ± 6	2 of 4	4.93	None
Larval Salivary gland	2 ± 1	0 of 4	1.19	None
Larval midgut	3 ± 0	0 of 4	1.91	Up
Larval tubule	3 ± 1	0 of 4	1.60	None
Larval hindgut	3 ± 1	0 of 4	1.65	None
Larval fat body	2 ± 0	0 of 4	1.10	None
Larval trachea	0 ± 0	0 of 4	0.50	None
Larval carcass	2 ± 0	0 of 4	1.47	None
S2 cells (growing)	1 ± 0	0 of 4	0.57	None
Whole fly	1 ± 0	0 of 4

Looking for CG31218-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720