Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG31262-RA through 18771 annotations produced 1 hits



(CG31262):

Annotation Number : CG31262
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051262
Gbrowse : chr3R:13043060-13045154 (-) // 100.0 //
Probeset : 1630767_at
Accessions : protein= NP_001163634; /// NP_732222;, nucleotide= NM_001170163; /// NM_169752;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005215 // transporter activity // inferred from sequence or structural similarity /// 0005215 // transporter activity /
FlyMine data for FBgn0051262.
Homophila reports that CG31262 is a close match (8e-30) to human gene SLC5A5;NIS (NP_000444), a gene associated with Hypothyroidism, congenital, 274400 (3).
VDRC has 1 RNAi stocks for FBgn0051262 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 00 of 4 0.10Down
Head3 ± 00 of 4 0.10Down
Eye1 ± 00 of 4 0.02Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.10Down
Salivary gland12 ± 30 of 4 0.18Down
Crop6 ± 10 of 4 0.10Down
Midgut6 ± 20 of 4 0.10Down
Tubule5 ± 20 of 4 0.10Down
Hindgut7 ± 12 of 4 0.10Down
Heart3 ± 10 of 4 0.05Down
Fat body6 ± 10 of 4 0.10Down
Ovary190 ± 24 of 4 2.90Up
Testis6 ± 10 of 4 0.10Down
Male accessory glands9 ± 20 of 4 0.10Down
Virgin spermatheca4 ± 20 of 4 0.07Down
Mated spermatheca6 ± 10 of 4 0.09Down
Adult carcass13 ± 20 of 4 0.20Down
Larval CNS3 ± 10 of 4 0.06Down
Larval Salivary gland7 ± 20 of 4 0.11Down
Larval midgut3 ± 10 of 4 0.06Down
Larval tubule5 ± 10 of 4 0.10Down
Larval hindgut9 ± 21 of 4 0.14Down
Larval fat body11 ± 10 of 4 0.20Down
Larval trachea19 ± 82 of 4 0.29Down
Larval carcass128 ± 324 of 4 1.93None
S2 cells (growing)4 ± 10 of 4 0.07Down
Whole fly66 ± 54 of 4

Looking for CG31262-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime