FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31317-RA through 18771 annotations produced 1 hits

heartbroken (stumps):

Annotation Number : CG31317
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020299
Gbrowse : chr3R:10418184-10433804 (+) // 100.0 //
Probeset : 1634063_a_at
Accessions : protein= NP_001097792; /// NP_731923; /// NP_731924;, nucleotide= NM_001104322; /// NM_169588; /// NM_169589;
Pathway : open tracheal system // inferred from mutant phenotype /// 0007427 // epithelial cell migration
Interpro : open tracheal system // traceable author statement /// 0007428 // primary branching
FlyMine data for FBgn0020299.
BDGP gene expression has embryonic in situ data for stumps: 52 pix of staining in 18 body parts.
BioGrid reports that CG31317 interacts with CG8676 CG9375 CG9375 CG9375 CG1389 CG32134 CG32134 CG7223 CG7223 CG4608 CG4608 CG4608 CG4608 .
VDRC has 2 RNAi stocks for FBgn0020299 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	390 ± 9	4 of 4	6.30	Up
Head	246 ± 6	4 of 4	4.00	Up
Eye	127 ± 2	4 of 4	2.05	Up
Thoracicoabdominal ganglion	701 ± 35	4 of 4	11.30	Up
Salivary gland	961 ± 29	4 of 4	15.48	Up
Crop	219 ± 6	4 of 4	3.50	Up
Midgut	76 ± 4	4 of 4	1.20	Up
Tubule	41 ± 7	4 of 4	0.70	Down
Hindgut	118 ± 3	4 of 4	1.90	Up
Heart	112 ± 5	4 of 4	1.81	Up
Fat body	63 ± 8	4 of 4	1.02	None
Ovary	15 ± 2	4 of 4	0.20	Down
Testis	52 ± 1	4 of 4	0.80	Down
Male accessory glands	92 ± 5	4 of 4	1.50	Up
Virgin spermatheca	30 ± 2	4 of 4	0.50	Down
Mated spermatheca	42 ± 5	4 of 4	0.69	Down
Adult carcass	146 ± 12	4 of 4	2.40	Up
Larval CNS	238 ± 14	4 of 4	3.84	Up
Larval Salivary gland	18 ± 1	4 of 4	0.30	Down
Larval midgut	67 ± 3	4 of 4	1.09	None
Larval tubule	8 ± 1	0 of 4	0.10	Down
Larval hindgut	93 ± 3	4 of 4	1.51	Up
Larval fat body	43 ± 4	4 of 4	0.70	Down
Larval trachea	995 ± 169	4 of 4	16.02	Up
Larval carcass	139 ± 16	4 of 4	2.25	Up
S2 cells (growing)	0 ± 0	0 of 4	0.01	Down
Whole fly	62 ± 3	4 of 4

Looking for CG31317-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720