Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG31320-RA through 18771 annotations produced 1 hits



(CG31320):

Annotation Number : CG31320
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051320
Gbrowse : chr3R:10184077-10187461 (-) // 100.0 //
Probeset : 1632590_at
Accessions : protein= NP_731905;, nucleotide= NM_169581;
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0051320.
BDGP gene expression has embryonic in situ data for CG31320: 10 pix of staining in 6 body parts.
VDRC has 2 RNAi stocks for FBgn0051320 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain20 ± 04 of 4 0.30Down
Head22 ± 24 of 4 0.30Down
Eye21 ± 14 of 4 0.34Down
Thoracicoabdominal ganglion21 ± 14 of 4 0.30Down
Salivary gland40 ± 24 of 4 0.63Down
Crop18 ± 12 of 4 0.30Down
Midgut37 ± 24 of 4 0.60Down
Tubule36 ± 14 of 4 0.60Down
Hindgut22 ± 14 of 4 0.30Down
Heart19 ± 14 of 4 0.31Down
Fat body30 ± 44 of 4 0.47Down
Ovary37 ± 34 of 4 0.60Down
Testis492 ± 124 of 4 7.80Up
Male accessory glands30 ± 44 of 4 0.50Down
Virgin spermatheca33 ± 24 of 4 0.52Down
Mated spermatheca41 ± 34 of 4 0.66Down
Adult carcass26 ± 24 of 4 0.40Down
Larval CNS53 ± 84 of 4 0.84None
Larval Salivary gland24 ± 24 of 4 0.39Down
Larval midgut39 ± 24 of 4 0.62Down
Larval tubule13 ± 13 of 4 0.20Down
Larval hindgut18 ± 14 of 4 0.29Down
Larval fat body114 ± 484 of 4 1.80None
Larval trachea34 ± 24 of 4 0.55Down
Larval carcass24 ± 24 of 4 0.39Down
S2 cells (growing)63 ± 14 of 4 1.00None
Whole fly63 ± 34 of 4

Looking for CG31320-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime