FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31330-RA through 18771 annotations produced 1 hits

crossveinless-c (cv-c):

Annotation Number : CG31330
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086901
Gbrowse : chr3R:10252686-10258902 (-) // 100.0 //
Probeset : 1624110_at
Accessions : protein= NP_001097786; /// NP_001097788; /// NP_731907;, nucleotide= NM_001104316; /// NM_001104318; /// NM_169583;
Pathway : open tracheal system // inferred from mutant phenotype /// 0007443 // Malpighian tubule morphogenesis // inferred from
Interpro : open tracheal system // inferred from mutant phenotype /// 0035277 // spiracle morphogenesis
FlyMine data for FBgn0086901.
VDRC has 10 RNAi stocks for FBgn0086901 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.40	None
Head	1 ± 0	0 of 4	0.80	None
Eye	3 ± 1	0 of 4	2.69	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	2.20	None
Salivary gland	6 ± 4	0 of 4	4.17	None
Crop	3 ± 0	0 of 4	2.10	None
Midgut	7 ± 2	0 of 4	5.10	None
Tubule	3 ± 0	0 of 4	2.20	Up
Hindgut	9 ± 1	0 of 4	6.20	Up
Heart	1 ± 0	0 of 4	0.88	None
Fat body	6 ± 4	0 of 4	4.19	None
Ovary	0 ± 0	0 of 4	0.60	None
Testis	1 ± 0	0 of 4	1.00	None
Male accessory glands	4 ± 2	0 of 4	3.40	None
Virgin spermatheca	5 ± 1	0 of 4	3.97	None
Mated spermatheca	2 ± 0	0 of 4	1.69	None
Adult carcass	3 ± 1	0 of 4	2.40	None
Larval CNS	1 ± 1	0 of 4	0.84	None
Larval Salivary gland	6 ± 2	1 of 4	4.36	None
Larval midgut	3 ± 1	0 of 4	2.17	None
Larval tubule	5 ± 1	0 of 4	3.70	None
Larval hindgut	2 ± 0	0 of 4	1.84	None
Larval fat body	6 ± 2	0 of 4	4.20	None
Larval trachea	3 ± 2	0 of 4	2.64	None
Larval carcass	2 ± 1	0 of 4	1.95	None
S2 cells (growing)	12 ± 1	1 of 4	8.28	Up
Whole fly	1 ± 0	0 of 4

Looking for CG31330-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720