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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG31336-RA through 18771 annotations produced 1 hits



Gustatory receptor 93b /// Gustatory receptor 93c (Gr93b /// Gr93c):

Annotation Number : CG31336
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045470
Gbrowse : chr3R:17668242-17669505 (-) // 100.0 //
Probeset : 1625089_at
Accessions : protein= NP_732664;, nucleotide= NM_169972;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0045470.
VDRC has 2 RNAi stocks for FBgn0045470 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 11 of 4 0.90None
Head6 ± 00 of 4 2.20None
Eye5 ± 00 of 4 1.77None
Thoracicoabdominal ganglion5 ± 02 of 4 2.00None
Salivary gland8 ± 20 of 4 3.03None
Crop4 ± 11 of 4 1.60None
Midgut5 ± 21 of 4 1.80None
Tubule6 ± 01 of 4 2.20Up
Hindgut6 ± 12 of 4 2.10None
Heart4 ± 10 of 4 1.58None
Fat body6 ± 52 of 4 2.26None
Ovary2 ± 00 of 4 0.70None
Testis1 ± 00 of 4 0.60None
Male accessory glands5 ± 10 of 4 2.00None
Virgin spermatheca9 ± 12 of 4 3.18Up
Mated spermatheca13 ± 23 of 4 4.63Up
Adult carcass8 ± 10 of 4 2.90Up
Larval CNS4 ± 13 of 4 1.59None
Larval Salivary gland3 ± 10 of 4 1.17None
Larval midgut5 ± 02 of 4 1.72None
Larval tubule5 ± 11 of 4 1.70None
Larval hindgut2 ± 00 of 4 1.02None
Larval fat body5 ± 11 of 4 1.80None
Larval trachea3 ± 22 of 4 1.37None
Larval carcass6 ± 11 of 4 2.17None
S2 cells (growing)3 ± 01 of 4 1.31None
Whole fly2 ± 11 of 4

Looking for CG31336-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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