Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG31381-RA through 18771 annotations produced 1 hits



(CG31381):

Annotation Number : CG31381
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0043799
Gbrowse : chr3R:20702942-20704507 (+) // 100.0 //
Probeset : 1628813_at
Accessions : protein= NP_733057;, nucleotide= NM_170178;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electro
FlyMine data for FBgn0043799.
VDRC has 2 RNAi stocks for FBgn0043799 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain11 ± 14 of 4 0.50Down
Head10 ± 03 of 4 0.50Down
Eye18 ± 24 of 4 0.86None
Thoracicoabdominal ganglion12 ± 04 of 4 0.60Down
Salivary gland22 ± 32 of 4 1.06None
Crop15 ± 13 of 4 0.70Down
Midgut14 ± 01 of 4 0.70Down
Tubule9 ± 22 of 4 0.50Down
Hindgut7 ± 22 of 4 0.40Down
Heart18 ± 23 of 4 0.89None
Fat body29 ± 44 of 4 1.40Up
Ovary47 ± 34 of 4 2.30Up
Testis6 ± 13 of 4 0.30Down
Male accessory glands30 ± 34 of 4 1.40None
Virgin spermatheca17 ± 13 of 4 0.82None
Mated spermatheca21 ± 24 of 4 1.02None
Adult carcass11 ± 42 of 4 0.50None
Larval CNS21 ± 44 of 4 1.02None
Larval Salivary gland36 ± 54 of 4 1.72None
Larval midgut9 ± 10 of 4 0.42Down
Larval tubule9 ± 23 of 4 0.50Down
Larval hindgut10 ± 13 of 4 0.50Down
Larval fat body30 ± 44 of 4 1.40None
Larval trachea25 ± 24 of 4 1.21Up
Larval carcass14 ± 30 of 4 0.66None
S2 cells (growing)13 ± 14 of 4 0.63Down
Whole fly21 ± 04 of 4

Looking for CG31381-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime