FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3164-RA through 18771 annotations produced 1 hits

(CG3164):

Annotation Number : CG3164
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025683
Gbrowse : chr2L:122614-130791 (-) // 100.0 //
Probeset : 1641004_a_at
Accessions : protein= NP_001033865; /// NP_608494; /// NP_722605; /// NP_995603;, nucleotide= NM_001038776; /// NM_134650; /// NM_164366; /// NM_205881;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0005215 // transporter activity // inferred fr
FlyMine data for FBgn0025683.
BDGP gene expression has embryonic in situ data for BEST:CK02656: 19 pix of staining in 5 body parts.
Homophila reports that CG3164 is a close match (7e-11) to human gene ABCB3;PSF2;RING11;TAP2 (NP_000535), a gene associated with Bare lymphocyte syndrome, type I, due to TAP2 deficiency, 604571 (3);Wegener-like granulomatosis (3).
VDRC has 3 RNAi stocks for FBgn0025683 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	412 ± 8	4 of 4	0.40	Down
Head	2113 ± 37	4 of 4	1.90	Up
Eye	1072 ± 95	4 of 4	0.99	None
Thoracicoabdominal ganglion	472 ± 24	4 of 4	0.40	Down
Salivary gland	1757 ± 61	4 of 4	1.62	Up
Crop	4342 ± 189	4 of 4	4.00	Up
Midgut	2582 ± 67	4 of 4	2.40	Up
Tubule	1208 ± 28	4 of 4	1.10	Up
Hindgut	2413 ± 99	4 of 4	2.20	Up
Heart	3606 ± 188	4 of 4	3.32	Up
Fat body	4036 ± 365	4 of 4	3.72	Up
Ovary	371 ± 10	4 of 4	0.30	Down
Testis	132 ± 3	4 of 4	0.10	Down
Male accessory glands	623 ± 27	4 of 4	0.60	Down
Virgin spermatheca	2822 ± 36	4 of 4	2.60	Up
Mated spermatheca	2915 ± 88	4 of 4	2.69	Up
Adult carcass	3381 ± 100	4 of 4	3.10	Up
Larval CNS	502 ± 60	4 of 4	0.46	Down
Larval Salivary gland	464 ± 27	4 of 4	0.43	Down
Larval midgut	1583 ± 33	4 of 4	1.46	Up
Larval tubule	1867 ± 43	4 of 4	1.70	Up
Larval hindgut	741 ± 44	4 of 4	0.68	Down
Larval fat body	1642 ± 161	4 of 4	1.50	Up
Larval trachea	1024 ± 50	4 of 4	0.94	None
Larval carcass	983 ± 44	4 of 4	0.91	None
S2 cells (growing)	1298 ± 38	4 of 4	1.20	Up
Whole fly	1085 ± 40	4 of 4

Looking for CG3164-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720