FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31651-RA through 18771 annotations produced 1 hits

polypeptide GalNAc transferase 5 (pgant5):

Annotation Number : CG31651
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031681
Gbrowse : chr2L:5072155-5093515 (-) // 100.0 //
Probeset : 1635173_at
Accessions : protein= NP_001036338; /// NP_608906;, nucleotide= NM_001042873; /// NM_135062;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : "0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from direct assay /// 0004653 // polypept
FlyMine data for FBgn0031681.
Homophila reports that CG31651 is a close match (2e-114) to human gene GALNT3;HFTC;HHS (NP_004473), a gene associated with Hyperostosis-hyperphosphatemia syndrome, 610233 (3);Tumoral calcinosis, hyperphosphatemic, familial, 211900 (3).
VDRC has 2 RNAi stocks for FBgn0031681 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	345 ± 4	4 of 4	2.60	Up
Head	203 ± 12	4 of 4	1.50	Up
Eye	233 ± 7	4 of 4	1.75	Up
Thoracicoabdominal ganglion	271 ± 2	4 of 4	2.00	Up
Salivary gland	603 ± 18	4 of 4	4.53	Up
Crop	217 ± 9	4 of 4	1.60	Up
Midgut	195 ± 15	4 of 4	1.50	Up
Tubule	143 ± 4	4 of 4	1.10	Up
Hindgut	147 ± 2	4 of 4	1.10	None
Heart	167 ± 8	4 of 4	1.26	None
Fat body	257 ± 14	4 of 4	1.93	Up
Ovary	122 ± 17	4 of 4	0.90	None
Testis	41 ± 3	4 of 4	0.30	Down
Male accessory glands	659 ± 25	4 of 4	4.90	Up
Virgin spermatheca	211 ± 9	4 of 4	1.59	Up
Mated spermatheca	191 ± 14	4 of 4	1.44	Up
Adult carcass	125 ± 1	4 of 4	0.90	None
Larval CNS	380 ± 42	4 of 4	2.86	Up
Larval Salivary gland	2937 ± 51	4 of 4	22.05	Up
Larval midgut	163 ± 8	4 of 4	1.23	None
Larval tubule	495 ± 32	4 of 4	3.70	Up
Larval hindgut	333 ± 23	4 of 4	2.50	Up
Larval fat body	195 ± 14	4 of 4	1.50	Up
Larval trachea	348 ± 80	4 of 4	2.61	Up
Larval carcass	290 ± 20	4 of 4	2.18	Up
S2 cells (growing)	828 ± 27	4 of 4	6.22	Up
Whole fly	133 ± 16	4 of 4

Looking for CG31651-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720