FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31692-RA through 18771 annotations produced 1 hits

"fructose-1 (6-bisphosphatase"):

Annotation Number : CG31692
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : chr2L:19761578-19764134 (-) // 100.0 //
Probeset : 1641066_s_at
Accessions : protein= , nucleotide= NP_610001; /// NP_724223;
Pathway : 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0016051 // carbohydrate biosyntheti
Interpro : 0005737 // cytoplasm // inferred from electronic annotation
FlyMine data for full length.
Homophila reports that CG31692 is a close match (5e-111) to human gene FBP1 (NP_000498), a gene associated with Fructose-1,6-bidphosphatase deficiency, 229700 (3).
BioGrid reports that CG31692 interacts with CG6707 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	33 ± 4	4 of 4	0.10	Down
Head	987 ± 72	4 of 4	2.30	Up
Eye	449 ± 54	4 of 4	1.05	None
Thoracicoabdominal ganglion	37 ± 5	4 of 4	0.10	Down
Salivary gland	1090 ± 59	4 of 4	2.55	Up
Crop	713 ± 28	4 of 4	1.70	Up
Midgut	491 ± 37	4 of 4	1.20	None
Tubule	1926 ± 80	4 of 4	4.50	Up
Hindgut	303 ± 17	4 of 4	0.70	Down
Heart	1740 ± 148	4 of 4	4.07	Up
Fat body	3007 ± 390	4 of 4	7.04	Up
Ovary	85 ± 2	4 of 4	0.20	Down
Testis	11 ± 0	4 of 4	0.00	Down
Male accessory glands	212 ± 6	4 of 4	0.50	Down
Virgin spermatheca	4037 ± 136	4 of 4	9.45	Up
Mated spermatheca	3668 ± 169	4 of 4	8.59	Up
Adult carcass	1884 ± 80	4 of 4	4.40	Up
Larval CNS	25 ± 5	4 of 4	0.06	Down
Larval Salivary gland	1484 ± 177	4 of 4	3.47	Up
Larval midgut	252 ± 15	4 of 4	0.59	Down
Larval tubule	276 ± 10	4 of 4	0.60	Down
Larval hindgut	239 ± 11	4 of 4	0.56	Down
Larval fat body	1512 ± 138	4 of 4	3.50	Up
Larval trachea	245 ± 44	4 of 4	0.57	Down
Larval carcass	836 ± 102	4 of 4	1.96	Up
S2 cells (growing)	66 ± 3	4 of 4	0.16	Down
Whole fly	427 ± 15	4 of 4

Looking for CG31692-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720