FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31705-RA through 18771 annotations produced 1 hits

(CG31705):

Annotation Number : CG31705
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028490
Gbrowse : chr2L:11523299-11528201 (-) // 100.0 //
Probeset : 1636149_at
Accessions : protein= NP_609509; /// NP_995686; /// NP_995687;, nucleotide= NM_135665; /// NM_205964; /// NM_205965;
FlyMine data for FBgn0028490.
BDGP gene expression has embryonic in situ data for BcDNA:GH07269: 18 pix of staining in 5 body parts.
TRiP has 1 RNAi stocks for FBgn0028490 available for purchase.
VDRC has 1 RNAi stocks for FBgn0028490 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2029 ± 29	4 of 4	3.90	Up
Head	1805 ± 53	4 of 4	3.50	Up
Eye	2360 ± 121	4 of 4	4.56	Up
Thoracicoabdominal ganglion	2191 ± 98	4 of 4	4.20	Up
Salivary gland	7139 ± 77	4 of 4	13.80	Up
Crop	617 ± 14	4 of 4	1.20	Up
Midgut	100 ± 6	4 of 4	0.20	Down
Tubule	387 ± 28	4 of 4	0.70	Down
Hindgut	333 ± 11	4 of 4	0.60	Down
Heart	2499 ± 54	4 of 4	4.83	Up
Fat body	2644 ± 295	4 of 4	5.11	Up
Ovary	224 ± 6	4 of 4	0.40	Down
Testis	211 ± 14	4 of 4	0.40	Down
Male accessory glands	89 ± 3	4 of 4	0.20	Down
Virgin spermatheca	2490 ± 32	4 of 4	4.81	Up
Mated spermatheca	2133 ± 111	4 of 4	4.12	Up
Adult carcass	1897 ± 39	4 of 4	3.70	Up
Larval CNS	924 ± 75	4 of 4	1.79	Up
Larval Salivary gland	1029 ± 46	4 of 4	1.99	Up
Larval midgut	131 ± 7	4 of 4	0.25	Down
Larval tubule	625 ± 15	4 of 4	1.20	Up
Larval hindgut	436 ± 23	4 of 4	0.84	None
Larval fat body	3313 ± 410	4 of 4	6.40	Up
Larval trachea	1779 ± 229	4 of 4	3.44	Up
Larval carcass	1258 ± 106	4 of 4	2.43	Up
S2 cells (growing)	2129 ± 62	4 of 4	4.12	Up
Whole fly	517 ± 28	4 of 4

Looking for CG31705-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720