FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31744-RA through 18771 annotations produced 1 hits

Gustatory receptor 36b (Gr36b):

Annotation Number : CG31744
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045486
Gbrowse : chr2L:17178771-17180064 (+) // 100.0 //
Probeset : 1623628_at
Accessions : protein= NP_724039;, nucleotide= NM_165206;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0045486.
VDRC has 1 RNAi stocks for FBgn0045486 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	1 of 4	0.90	None
Head	4 ± 0	0 of 4	1.60	None
Eye	4 ± 1	0 of 4	1.57	None
Thoracicoabdominal ganglion	3 ± 0	0 of 4	1.20	None
Salivary gland	6 ± 1	0 of 4	2.51	None
Crop	3 ± 1	0 of 4	1.40	None
Midgut	4 ± 0	0 of 4	1.80	None
Tubule	3 ± 0	0 of 4	1.20	Up
Hindgut	4 ± 0	0 of 4	1.70	Up
Heart	1 ± 0	0 of 4	0.66	None
Fat body	5 ± 1	1 of 4	2.19	Up
Ovary	2 ± 0	0 of 4	1.10	None
Testis	0 ± 0	0 of 4	0.30	None
Male accessory glands	4 ± 1	0 of 4	1.50	None
Virgin spermatheca	3 ± 1	1 of 4	1.40	None
Mated spermatheca	6 ± 1	2 of 4	2.24	None
Adult carcass	8 ± 2	0 of 4	3.00	None
Larval CNS	2 ± 1	0 of 4	0.91	None
Larval Salivary gland	1 ± 0	0 of 4	0.69	None
Larval midgut	3 ± 1	0 of 4	1.30	None
Larval tubule	4 ± 1	0 of 4	1.70	None
Larval hindgut	2 ± 0	0 of 4	0.75	None
Larval fat body	6 ± 1	0 of 4	2.30	Up
Larval trachea	3 ± 2	1 of 4	1.15	None
Larval carcass	4 ± 1	0 of 4	1.52	None
S2 cells (growing)	3 ± 0	1 of 4	1.44	None
Whole fly	2 ± 0	0 of 4

Looking for CG31744-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720