FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31753-RA through 18771 annotations produced 2 hits

hamlet (ham):

Annotation Number : CG15907
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045852
Gbrowse : chr2L:18779456-18782304 (-) // 100.0 //
Probeset : 1628895_at
Accessions : protein= NP_724130;, nucleotide= NM_165262;
Pathway : DNA-dependent // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // inferred from electronic anno
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay ///
FlyMine data for FBgn0045852.
TRiP has 2 RNAi stocks for FBgn0045852 available for purchase.
VDRC has 3 RNAi stocks for FBgn0045852 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 0	0 of 4	2.40	None
Head	0 ± 0	0 of 4	0.50	None
Eye	3 ± 1	0 of 4	2.09	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.80	None
Salivary gland	3 ± 0	0 of 4	1.94	None
Crop	1 ± 0	0 of 4	0.60	None
Midgut	1 ± 0	0 of 4	1.00	None
Tubule	2 ± 0	0 of 4	1.60	Up
Hindgut	3 ± 1	0 of 4	1.80	None
Heart	0 ± 0	0 of 4	0.51	None
Fat body	2 ± 2	0 of 4	1.24	None
Ovary	1 ± 1	0 of 4	1.00	None
Testis	4 ± 0	0 of 4	2.90	Up
Male accessory glands	10 ± 4	0 of 4	6.00	None
Virgin spermatheca	1 ± 0	0 of 4	0.82	None
Mated spermatheca	1 ± 0	0 of 4	1.03	None
Adult carcass	1 ± 0	0 of 4	0.70	None
Larval CNS	4 ± 2	0 of 4	2.38	None
Larval Salivary gland	2 ± 0	0 of 4	1.25	None
Larval midgut	1 ± 0	0 of 4	1.06	None
Larval tubule	1 ± 0	0 of 4	0.80	None
Larval hindgut	1 ± 0	0 of 4	0.63	None
Larval fat body	3 ± 0	0 of 4	1.90	None
Larval trachea	1 ± 0	0 of 4	0.75	None
Larval carcass	1 ± 0	0 of 4	0.85	None
S2 cells (growing)	1 ± 0	0 of 4	0.87	None
Whole fly	1 ± 0	0 of 4

hamlet (ham):

Annotation Number : CG31753
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045852
Gbrowse : chr2L:18763493-18776374 (-) // 100.0 //
Probeset : 1628089_at
Accessions : protein= NP_724130;, nucleotide= NM_165262;
Pathway : DNA-dependent // inferred from mutant phenotype /// 0007219 // Notch signaling pathway // inferred from electronic anno
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay ///
FlyMine data for FBgn0045852.
Homophila reports that CG31753 is a close match (9e-11) to human gene IK1;IKZF1;LYF1;ZNFN1A1 (NP_006051), a gene associated with Leukemia, acute lymphoblastic (3).
TRiP has 2 RNAi stocks for FBgn0045852 available for purchase.
VDRC has 3 RNAi stocks for FBgn0045852 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	20 ± 2	4 of 4	2.70	None
Head	6 ± 1	1 of 4	0.90	None
Eye	4 ± 1	1 of 4	0.64	None
Thoracicoabdominal ganglion	4 ± 1	1 of 4	0.60	None
Salivary gland	8 ± 3	1 of 4	1.07	None
Crop	3 ± 1	0 of 4	0.40	Down
Midgut	17 ± 1	4 of 4	2.30	Up
Tubule	1 ± 0	0 of 4	0.20	Down
Hindgut	4 ± 1	0 of 4	0.50	None
Heart	13 ± 1	4 of 4	1.84	Up
Fat body	3 ± 2	0 of 4	0.39	Down
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	31 ± 2	4 of 4	4.20	Up
Male accessory glands	86 ± 3	4 of 4	11.60	Up
Virgin spermatheca	0 ± 0	0 of 4	0.07	Down
Mated spermatheca	3 ± 0	0 of 4	0.47	Down
Adult carcass	12 ± 4	0 of 4	1.60	None
Larval CNS	83 ± 6	4 of 4	11.19	Up
Larval Salivary gland	3 ± 2	0 of 4	0.52	None
Larval midgut	40 ± 1	4 of 4	5.35	Up
Larval tubule	3 ± 1	0 of 4	0.40	None
Larval hindgut	7 ± 1	3 of 4	0.95	None
Larval fat body	13 ± 1	1 of 4	1.80	Up
Larval trachea	4 ± 2	0 of 4	0.55	None
Larval carcass	0 ± 0	0 of 4	0.09	Down
S2 cells (growing)	7 ± 1	3 of 4	1.06	None
Whole fly	7 ± 0	1 of 4

Looking for CG31753-RA. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720