FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31811-RB through 18771 annotations produced 1 hits

centaurin gamma 1A (cenG1A):

Annotation Number : CG31811
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028509
Gbrowse : chr2L:13835566-13898715 (+) // 100.0 //
Probeset : 1624589_a_at
Accessions : protein= NP_523562; /// NP_723849; /// NP_723850;, nucleotide= NM_078838; /// NM_165067; /// NM_165068;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005096 // GTPase activator activity // inferre
FlyMine data for FBgn0028509.
BDGP gene expression has embryonic in situ data for cenG1A: 33 pix of staining in 23 body parts.
BioGrid reports that CG31811 interacts with CG5471 CG5933 CG6745 CG9986 .
TRiP has 1 RNAi stocks for FBgn0028509 available for purchase.
VDRC has 2 RNAi stocks for FBgn0028509 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	352 ± 16	4 of 4	2.10	Up
Head	268 ± 24	4 of 4	1.60	Up
Eye	285 ± 14	4 of 4	1.66	Up
Thoracicoabdominal ganglion	313 ± 6	4 of 4	1.80	Up
Salivary gland	112 ± 5	4 of 4	0.66	Down
Crop	142 ± 11	4 of 4	0.80	None
Midgut	216 ± 13	4 of 4	1.30	None
Tubule	304 ± 25	4 of 4	1.80	Up
Hindgut	120 ± 8	4 of 4	0.70	None
Heart	168 ± 29	4 of 4	0.98	None
Fat body	123 ± 8	4 of 4	0.72	None
Ovary	182 ± 4	4 of 4	1.10	None
Testis	34 ± 0	4 of 4	0.20	Down
Male accessory glands	51 ± 7	4 of 4	0.30	Down
Virgin spermatheca	138 ± 16	4 of 4	0.80	None
Mated spermatheca	111 ± 8	4 of 4	0.65	Down
Adult carcass	190 ± 7	4 of 4	1.10	None
Larval CNS	583 ± 115	4 of 4	3.39	Up
Larval Salivary gland	276 ± 19	4 of 4	1.61	Up
Larval midgut	185 ± 20	4 of 4	1.08	None
Larval tubule	243 ± 9	4 of 4	1.40	Up
Larval hindgut	205 ± 10	4 of 4	1.19	None
Larval fat body	85 ± 6	4 of 4	0.50	Down
Larval trachea	41 ± 7	4 of 4	0.24	Down
Larval carcass	144 ± 5	4 of 4	0.84	None
S2 cells (growing)	104 ± 5	4 of 4	0.61	Down
Whole fly	172 ± 17	4 of 4

Looking for CG31811-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720