Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for CG31818-RA through 18771 annotations produced 1 hits


CG31737 (CG42266):

Annotation Number : CG31818
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259151
Gbrowse : chr2L:16338075-16338841 (-) // 100.0 //
Probeset : 1632740_at
Accessions : protein= NP_001137827;, nucleotide= NM_001144355;
FlyMine data for FBgn0259151.
VDRC has 3 RNAi stocks for FBgn0259151 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.10Down
Head1 ± 00 of 4 0.10Down
Eye0 ± 00 of 4 0.03Down
Thoracicoabdominal ganglion2 ± 00 of 4 0.10Down
Salivary gland5 ± 20 of 4 0.30Down
Crop1 ± 00 of 4 0.10Down
Midgut2 ± 10 of 4 0.10Down
Tubule1 ± 00 of 4 0.10Down
Hindgut1 ± 00 of 4 0.10Down
Heart1 ± 00 of 4 0.09Down
Fat body1 ± 00 of 4 0.06Down
Ovary0 ± 00 of 4 0.00Down
Testis348 ± 134 of 419.80Up
Male accessory glands0 ± 00 of 4 0.10Down
Virgin spermatheca0 ± 00 of 4 0.04Down
Mated spermatheca0 ± 00 of 4 0.05Down
Adult carcass0 ± 00 of 4 0.00Down
Larval CNS0 ± 00 of 4 0.04Down
Larval Salivary gland2 ± 00 of 4 0.11Down
Larval midgut1 ± 00 of 4 0.05Down
Larval tubule1 ± 00 of 4 0.10Down
Larval hindgut3 ± 10 of 4 0.20Down
Larval fat body17 ± 73 of 4 1.00None
Larval trachea2 ± 20 of 4 0.11Down
Larval carcass1 ± 00 of 4 0.06Down
S2 cells (growing)1 ± 00 of 4 0.07Down
Whole fly17 ± 24 of 4

Looking for CG31818-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime