FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG31820-RA through 18771 annotations produced 1 hits

(CG31820):

Annotation Number : CG31820
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051820
Gbrowse : chr2L:16005767-16006279 (-) // 100.0 //
Probeset : 1633574_at
Accessions : protein= NP_723947;, nucleotide= NM_165143;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0051820.
BDGP gene expression has embryonic in situ data for CG31820: 6 pix of staining in 1 body parts.
BioGrid reports that CG31820 interacts with CG7176 CG8568 CG9908 .
VDRC has 4 RNAi stocks for FBgn0051820 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 1	3 of 4	0.00	Down
Head	6 ± 1	1 of 4	0.00	Down
Eye	3 ± 1	0 of 4	0.00	Down
Thoracicoabdominal ganglion	14 ± 2	4 of 4	0.00	Down
Salivary gland	19 ± 3	1 of 4	0.02	Down
Crop	12 ± 2	3 of 4	0.00	Down
Midgut	11 ± 1	2 of 4	0.00	Down
Tubule	9 ± 2	1 of 4	0.00	Down
Hindgut	8 ± 0	1 of 4	0.00	Down
Heart	6 ± 0	0 of 4	0.01	Down
Fat body	12 ± 7	3 of 4	0.01	Down
Ovary	4 ± 1	1 of 4	0.00	Down
Testis	3267 ± 129	4 of 4	3.70	Up
Male accessory glands	16 ± 3	2 of 4	0.00	Down
Virgin spermatheca	20 ± 1	3 of 4	0.02	Down
Mated spermatheca	24 ± 3	4 of 4	0.03	Down
Adult carcass	40 ± 10	3 of 4	0.00	Down
Larval CNS	8 ± 1	3 of 4	0.01	Down
Larval Salivary gland	10 ± 2	2 of 4	0.01	Down
Larval midgut	17 ± 4	2 of 4	0.02	Down
Larval tubule	7 ± 1	0 of 4	0.00	Down
Larval hindgut	9 ± 0	3 of 4	0.01	Down
Larval fat body	548 ± 255	4 of 4	0.60	None
Larval trachea	37 ± 52	2 of 4	0.04	Down
Larval carcass	16 ± 2	4 of 4	0.02	Down
S2 cells (growing)	9 ± 0	3 of 4	0.01	Down
Whole fly	891 ± 58	4 of 4

Looking for CG31820-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720