Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG31821-RA through 18771 annotations produced 1 hits



(CG31821):

Annotation Number : CG31821
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051821
Gbrowse : chr2L:15901040-15902377 (-) // 100.0 //
Probeset : 1629542_at
Accessions : protein= NP_609771;, nucleotide= NM_135927;
Interpro : 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004185 // serine-type carboxypeptidase
FlyMine data for FBgn0051821.
Homophila reports that CG31821 is a close match (4e-15) to human gene CTSA;GLB2;GSL;NGBE;PPGB (NP_000299), a gene associated with Galactosialidosis (3).
VDRC has 2 RNAi stocks for FBgn0051821 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10Down
Head1 ± 00 of 4 0.00Down
Eye2 ± 10 of 4 0.08Down
Thoracicoabdominal ganglion2 ± 20 of 4 0.10Down
Salivary gland10 ± 50 of 4 0.39Down
Crop1316 ± 694 of 448.00Up
Midgut317 ± 104 of 411.60Up
Tubule60 ± 74 of 4 2.20Up
Hindgut194 ± 74 of 4 7.10Up
Heart22 ± 64 of 4 0.83None
Fat body5 ± 30 of 4 0.19Down
Ovary4 ± 10 of 4 0.10Down
Testis1 ± 00 of 4 0.00Down
Male accessory glands19 ± 51 of 4 0.70None
Virgin spermatheca0 ± 00 of 4 0.03Down
Mated spermatheca3 ± 20 of 4 0.14Down
Adult carcass1 ± 00 of 4 0.10Down
Larval CNS2 ± 10 of 4 0.07Down
Larval Salivary gland1 ± 00 of 4 0.04Down
Larval midgut260 ± 224 of 4 9.51Up
Larval tubule53 ± 24 of 4 1.90Up
Larval hindgut331 ± 254 of 412.08Up
Larval fat body14 ± 33 of 4 0.50Down
Larval trachea5 ± 81 of 4 0.19Down
Larval carcass15 ± 20 of 4 0.56Down
S2 cells (growing)2 ± 00 of 4 0.08Down
Whole fly27 ± 24 of 4

Looking for CG31821-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime