FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3187-RA through 18771 annotations produced 1 hits

Sirt4 (Sirt4):

Annotation Number : CG3187
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029783
Gbrowse : chrX:5558660-5560002 (-) // 100.0 //
Probeset : 1623881_s_at
Accessions : protein= NP_572241; /// NP_727013; /// NP_727014;, nucleotide= NM_132013; /// NM_167041; /// NM_167042;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : "0008270 // zinc ion binding // inferred from electronic annotation /// 0016811 // hydrolase activity
FlyMine data for FBgn0029783.
BDGP gene expression has embryonic in situ data for CG3187: 21 pix of staining in 7 body parts.
BioGrid reports that CG3187 interacts with CG32356 CG3533 CG3664 CG3731 CG3906 Dmel CG34168 CG7017 CG7361 CG7437 CG8942 CG9036 CG6521 CG15112 CG4184 .
TRiP has 3 RNAi stocks for FBgn0029783 available for purchase.
VDRC has 2 RNAi stocks for FBgn0029783 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	77 ± 3	4 of 4	1.20	None
Head	82 ± 4	4 of 4	1.30	Up
Eye	120 ± 8	4 of 4	1.83	Up
Thoracicoabdominal ganglion	86 ± 3	4 of 4	1.30	Up
Salivary gland	99 ± 7	4 of 4	1.52	Up
Crop	94 ± 0	4 of 4	1.40	Up
Midgut	68 ± 4	4 of 4	1.00	None
Tubule	97 ± 5	4 of 4	1.50	Up
Hindgut	96 ± 3	4 of 4	1.50	Up
Heart	145 ± 6	4 of 4	2.22	Up
Fat body	132 ± 19	4 of 4	2.01	Up
Ovary	54 ± 2	4 of 4	0.80	None
Testis	48 ± 1	4 of 4	0.70	Down
Male accessory glands	26 ± 1	4 of 4	0.40	Down
Virgin spermatheca	109 ± 6	4 of 4	1.67	Up
Mated spermatheca	77 ± 4	4 of 4	1.18	None
Adult carcass	136 ± 8	4 of 4	2.10	Up
Larval CNS	55 ± 6	4 of 4	0.84	None
Larval Salivary gland	91 ± 11	4 of 4	1.38	None
Larval midgut	118 ± 4	4 of 4	1.81	Up
Larval tubule	94 ± 5	4 of 4	1.40	Up
Larval hindgut	132 ± 3	4 of 4	2.02	Up
Larval fat body	72 ± 6	4 of 4	1.10	None
Larval trachea	108 ± 15	4 of 4	1.65	Up
Larval carcass	180 ± 16	4 of 4	2.75	Up
S2 cells (growing)	64 ± 1	4 of 4	0.98	None
Whole fly	65 ± 5	4 of 4

Looking for CG3187-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720