Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG31975-RA through 18771 annotations produced 1 hits



/// (CG31975 /// CG31976):

Annotation Number : CG31975
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051975 /// FBgn0051976
Gbrowse : chr2L:139470-140933 (-) // 100.0 //
Probeset : 1635578_at
Accessions : protein= NP_001162840; /// NP_722607; /// NP_722608;, nucleotide= NM_001169369; /// NM_164368; /// NM_164369;
FlyMine data for FBgn0051975 /// FBgn0051976.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 ± 13 of 4 0.40Down
Head7 ± 22 of 4 0.40Down
Eye5 ± 00 of 4 0.32Down
Thoracicoabdominal ganglion7 ± 11 of 4 0.40Down
Salivary gland18 ± 52 of 4 1.02None
Crop8 ± 11 of 4 0.40Down
Midgut84 ± 34 of 4 4.60Up
Tubule391 ± 624 of 421.40Up
Hindgut27 ± 34 of 4 1.50None
Heart7 ± 11 of 4 0.41Down
Fat body15 ± 24 of 4 0.84None
Ovary4 ± 01 of 4 0.20Down
Testis6 ± 02 of 4 0.30Down
Male accessory glands9 ± 10 of 4 0.50Down
Virgin spermatheca10 ± 23 of 4 0.58Down
Mated spermatheca7 ± 10 of 4 0.41Down
Adult carcass15 ± 41 of 4 0.80None
Larval CNS6 ± 03 of 4 0.35Down
Larval Salivary gland11 ± 13 of 4 0.61Down
Larval midgut30 ± 44 of 4 1.66None
Larval tubule56 ± 84 of 4 3.10Up
Larval hindgut9 ± 13 of 4 0.51Down
Larval fat body21 ± 33 of 4 1.20None
Larval trachea7 ± 33 of 4 0.41Down
Larval carcass9 ± 02 of 4 0.54Down
S2 cells (growing)873 ± 504 of 447.81Up
Whole fly18 ± 04 of 4

Looking for CG31975-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime