Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32074-RA through 18771 annotations produced 1 hits



(CG32074):

Annotation Number : CG32074
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052074
Gbrowse : chr3L:11128105-11128441 (+) // 93.69 // /// chr3L:11125087-11125420 (-) // 100.0 //
Probeset : 1639799_s_at
Accessions : protein= NP_729676;, nucleotide= NM_168447;
FlyMine data for FBgn0052074.
VDRC has 2 RNAi stocks for FBgn0052074 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain13 13 of 4 9.60Up
Head2 00 of 4 1.60None
Eye2 10 of 4 1.71None
Thoracicoabdominal ganglion12 03 of 4 9.10Up
Salivary gland3 10 of 4 2.27None
Crop1 00 of 4 1.30None
Midgut2 10 of 4 1.90None
Tubule2 00 of 4 1.50None
Hindgut1 00 of 4 1.30None
Heart3 10 of 4 2.35None
Fat body4 21 of 4 3.22None
Ovary2 10 of 4 2.00None
Testis3 10 of 4 2.20None
Male accessory glands6 30 of 4 4.70None
Virgin spermatheca2 10 of 4 1.42None
Mated spermatheca0 00 of 4 0.64None
Adult carcass1 00 of 4 1.20None
Larval CNS17 34 of 412.75Up
Larval Salivary gland1965 7474 of 41429.22None
Larval midgut1 00 of 4 0.89None
Larval tubule1 00 of 4 1.30None
Larval hindgut1 00 of 4 1.00None
Larval fat body2 10 of 4 1.70None
Larval trachea1 10 of 4 0.89None
Larval carcass4 00 of 4 3.42Up
S2 cells (growing)1 00 of 4 0.78None
Whole fly1 00 of 4

Looking for CG32074-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime