FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG32089-RA through 18771 annotations produced 1 hits

Vha16-2 (Vha16-2):

Annotation Number : CG32089
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028668
Gbrowse : chr3L:11468097-11468574 (+) // 100.0 //
Probeset : 1630016_at
Accessions : protein= NP_729707;, nucleotide= NM_168459;
Pathway : engulfment // inferred from mutant phenotype /// 0015986 // ATP synthesis coupled proton transport // inferred from ele
Interpro : V0 domain // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from electronic annota
FlyMine data for FBgn0028668.
VDRC has 2 RNAi stocks for FBgn0028668 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.20	Down
Head	1 ± 0	0 of 4	0.10	Down
Eye	3 ± 0	0 of 4	0.27	Down
Thoracicoabdominal ganglion	5 ± 3	0 of 4	0.50	None
Salivary gland	3 ± 0	0 of 4	0.23	Down
Crop	5 ± 1	0 of 4	0.40	Down
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	3 ± 0	0 of 4	0.20	Down
Hindgut	1 ± 0	0 of 4	0.10	Down
Heart	4 ± 1	0 of 4	0.32	Down
Fat body	3 ± 1	0 of 4	0.23	Down
Ovary	2 ± 1	0 of 4	0.20	Down
Testis	178 ± 4	4 of 4	13.80	Up
Male accessory glands	5 ± 1	0 of 4	0.40	Down
Virgin spermatheca	3 ± 1	0 of 4	0.24	Down
Mated spermatheca	1 ± 0	0 of 4	0.09	Down
Adult carcass	6 ± 4	0 of 4	0.50	None
Larval CNS	1 ± 0	0 of 4	0.14	Down
Larval Salivary gland	2 ± 0	0 of 4	0.17	Down
Larval midgut	2 ± 1	0 of 4	0.17	Down
Larval tubule	3 ± 1	0 of 4	0.20	Down
Larval hindgut	2 ± 0	0 of 4	0.18	Down
Larval fat body	33 ± 11	3 of 4	2.60	None
Larval trachea	5 ± 3	1 of 4	0.42	Down
Larval carcass	2 ± 0	0 of 4	0.22	Down
S2 cells (growing)	1 ± 0	0 of 4	0.08	Down
Whole fly	12 ± 2	4 of 4

Looking for CG32089-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720