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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32133-RA through 18771 annotations produced 1 hits



CG32133 (ptip):

Annotation Number : CG32133
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052133
Gbrowse : chr3L:14014320-14021944 (-) // 99.99 //
Probeset : 1626376_at
Accessions : protein= NP_729947;, nucleotide= NM_168571;
Pathway : imaginal disc // inferred from mutant phenotype /// 0009880 // embryonic pattern specification // inferred from mutant
Interpro : 0005622 // intracellular // inferred from electronic annotation
FlyMine data for FBgn0052133.
TRiP has 2 RNAi stocks for FBgn0052133 available for purchase.
VDRC has 1 RNAi stocks for FBgn0052133 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain19 ± 14 of 4 0.60None
Head15 ± 22 of 4 0.50Down
Eye12 ± 11 of 4 0.37Down
Thoracicoabdominal ganglion14 ± 23 of 4 0.40Down
Salivary gland21 ± 62 of 4 0.65None
Crop24 ± 23 of 4 0.70None
Midgut17 ± 13 of 4 0.50Down
Tubule14 ± 12 of 4 0.40Down
Hindgut24 ± 34 of 4 0.70None
Heart11 ± 11 of 4 0.35Down
Fat body25 ± 63 of 4 0.77None
Ovary74 ± 24 of 4 2.20Up
Testis9 ± 04 of 4 0.30Down
Male accessory glands26 ± 13 of 4 0.80None
Virgin spermatheca14 ± 10 of 4 0.45Down
Mated spermatheca16 ± 30 of 4 0.50Down
Adult carcass24 ± 22 of 4 0.70None
Larval CNS58 ± 24 of 4 1.75Up
Larval Salivary gland47 ± 14 of 4 1.43Up
Larval midgut24 ± 04 of 4 0.72None
Larval tubule21 ± 14 of 4 0.60None
Larval hindgut23 ± 34 of 4 0.69None
Larval fat body22 ± 23 of 4 0.70None
Larval trachea22 ± 53 of 4 0.67None
Larval carcass29 ± 24 of 4 0.89None
S2 cells (growing)76 ± 14 of 4 2.31Up
Whole fly33 ± 44 of 4

Looking for CG32133-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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