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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32134-RA through 18771 annotations produced 1 hits



chr3L:14068871-14075985 (+) // 100.0 // (FGF receptor):

Annotation Number : CG32134
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1640670_at
Accessions : protein= , nucleotide= NP_001014583; /// NP_729956;
Pathway : "0001763 // morphogenesis of a branching structure // traceable author statement /// 0006468 // protein phosphorylation
Interpro : open tracheal system // inferred from mutant phenotype /// 0007427 // epithelial cell migration
Homophila reports that CG32134 is a close match (5e-11) to human gene ACVRL1;ACVRLK1;ALK1;HHT2 (NP_001070869), a gene associated with Hereditary hemorrhagic telangiectasia-2, 600376 (3).
BioGrid reports that CG32134 interacts with CG32443 CG9375 CG9375 CG18085 CG3938 CG12245 CG4354 CG4354 CG31317 CG31317 CG10037 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.50None
Head13 ± 00 of 4 5.90Up
Eye2 ± 10 of 4 0.91None
Thoracicoabdominal ganglion1 ± 00 of 4 0.70None
Salivary gland4 ± 10 of 4 1.74None
Crop70 ± 24 of 430.80Up
Midgut9 ± 20 of 4 4.10Up
Tubule2 ± 10 of 4 1.20None
Hindgut56 ± 24 of 424.50Up
Heart9 ± 11 of 4 4.28Up
Fat body2 ± 20 of 4 1.11None
Ovary0 ± 00 of 4 0.30None
Testis0 ± 00 of 4 0.30None
Male accessory glands2 ± 10 of 4 1.30None
Virgin spermatheca73 ± 63 of 432.10Up
Mated spermatheca73 ± 74 of 431.95Up
Adult carcass2 ± 00 of 4 1.00None
Larval CNS2 ± 10 of 4 1.12None
Larval Salivary gland1 ± 00 of 4 0.52None
Larval midgut2 ± 00 of 4 0.99None
Larval tubule3 ± 10 of 4 1.40None
Larval hindgut7 ± 10 of 4 3.22Up
Larval fat body2 ± 00 of 4 0.90None
Larval trachea223 ± 224 of 496.98Up
Larval carcass8 ± 10 of 4 3.59Up
S2 cells (growing)1 ± 00 of 4 0.51None
Whole fly2 ± 00 of 4

Looking for CG32134-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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