FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3225-RA through 18771 annotations produced 1 hits

(CG3225):

Annotation Number : CG3225
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031631
Gbrowse : chr2L:4815612-4818210 (-) // 100.0 //
Probeset : 1633686_at
Accessions : protein= NP_608860;, nucleotide= NM_135016;
Pathway : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred from sequence or structural similarity"
FlyMine data for FBgn0031631.
BDGP gene expression has embryonic in situ data for CG3225: 4 pix of staining in 1 body parts.
BioGrid reports that CG3225 interacts with CG5009 CG3632 CG3929 CG4700 CG4759 CG4799 CG4863 CG5271 CG5303 CG5873 CG6341 CG6418 CG6606 CG7583 CG8597 CG8854 CG8927 CG9244 CG9373 CG6447 CG6478 CG33101 .
VDRC has 1 RNAi stocks for FBgn0031631 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	34 ± 0	4 of 4	1.40	Up
Head	9 ± 1	3 of 4	0.40	Down
Eye	8 ± 1	1 of 4	0.32	Down
Thoracicoabdominal ganglion	31 ± 1	4 of 4	1.30	Up
Salivary gland	15 ± 3	0 of 4	0.63	None
Crop	7 ± 2	0 of 4	0.30	Down
Midgut	8 ± 2	0 of 4	0.30	Down
Tubule	4 ± 0	0 of 4	0.20	Down
Hindgut	3 ± 1	0 of 4	0.10	Down
Heart	4 ± 0	1 of 4	0.18	Down
Fat body	4 ± 1	0 of 4	0.18	Down
Ovary	39 ± 2	4 of 4	1.60	Up
Testis	56 ± 2	4 of 4	2.30	Up
Male accessory glands	9 ± 2	0 of 4	0.40	Down
Virgin spermatheca	4 ± 1	0 of 4	0.19	Down
Mated spermatheca	3 ± 1	0 of 4	0.14	Down
Adult carcass	9 ± 3	0 of 4	0.40	Down
Larval CNS	23 ± 3	4 of 4	0.95	None
Larval Salivary gland	12 ± 0	2 of 4	0.48	Down
Larval midgut	3 ± 2	0 of 4	0.14	Down
Larval tubule	5 ± 1	0 of 4	0.20	Down
Larval hindgut	5 ± 0	0 of 4	0.22	Down
Larval fat body	16 ± 3	1 of 4	0.70	None
Larval trachea	9 ± 0	2 of 4	0.39	Down
Larval carcass	3 ± 1	0 of 4	0.13	Down
S2 cells (growing)	23 ± 3	4 of 4	0.94	None
Whole fly	24 ± 2	4 of 4

Looking for CG3225-RA. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720