Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
About & FAQ
Top 50
Original data
Interesting meta-analysis

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for CG32252-RA through 18771 annotations produced 1 hits


Annotation Number : CG32252
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052252
Gbrowse : chr3L:4221688-4222734 (-) // 100.0 //
Probeset : 1628854_at
Accessions : protein= NP_728959;, nucleotide= NM_168068;
FlyMine data for FBgn0052252.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 0.10Down
Head2 00 of 4 0.10Down
Eye0 00 of 4 0.04Down
Thoracicoabdominal ganglion5 20 of 4 0.30Down
Salivary gland3 00 of 4 0.16Down
Crop2 10 of 4 0.10Down
Midgut5 01 of 4 0.30Down
Tubule5 00 of 4 0.30Down
Hindgut3 10 of 4 0.20Down
Heart3 10 of 4 0.17Down
Fat body3 20 of 4 0.18Down
Ovary4 11 of 4 0.20Down
Testis268 84 of 414.10Up
Male accessory glands8 21 of 4 0.50Down
Virgin spermatheca3 11 of 4 0.19Down
Mated spermatheca2 10 of 4 0.15Down
Adult carcass6 30 of 4 0.30Down
Larval CNS4 22 of 4 0.23Down
Larval Salivary gland3 10 of 4 0.17Down
Larval midgut4 22 of 4 0.24Down
Larval tubule10 11 of 4 0.50Down
Larval hindgut3 00 of 4 0.16Down
Larval fat body45 192 of 4 2.40None
Larval trachea6 61 of 4 0.36Down
Larval carcass1 00 of 4 0.10Down
S2 cells (growing)3 10 of 4 0.20Down
Whole fly19 04 of 4

Looking for CG32252-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime