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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32255-RA through 18771 annotations produced 1 hits



Gustatory receptor 64f (Gr64f):

Annotation Number : CG32255
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052255
Gbrowse : chr3L:4035798-4037539 (+) // 100.0 //
Probeset : 1633738_at
Accessions : protein= NP_728924;, nucleotide= NM_168052;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0052255.
VDRC has 2 RNAi stocks for FBgn0052255 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.40None
Head12 10 of 4 2.80Up
Eye3 00 of 4 0.75None
Thoracicoabdominal ganglion3 00 of 4 0.70None
Salivary gland13 40 of 4 2.95None
Crop6 10 of 4 1.30None
Midgut8 00 of 4 1.80None
Tubule2 00 of 4 0.60Down
Hindgut5 20 of 4 1.30None
Heart3 10 of 4 0.68None
Fat body8 20 of 4 1.73None
Ovary3 00 of 4 0.80None
Testis4 20 of 4 1.00None
Male accessory glands6 20 of 4 1.40None
Virgin spermatheca5 01 of 4 1.17None
Mated spermatheca5 10 of 4 1.20None
Adult carcass4 10 of 4 1.00None
Larval CNS5 30 of 4 1.10None
Larval Salivary gland2 10 of 4 0.62None
Larval midgut11 10 of 4 2.38None
Larval tubule5 10 of 4 1.20None
Larval hindgut5 10 of 4 1.11None
Larval fat body4 20 of 4 1.00None
Larval trachea3 30 of 4 0.79None
Larval carcass11 00 of 4 2.42None
S2 cells (growing)7 00 of 4 1.67None
Whole fly4 20 of 4

Looking for CG32255-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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