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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32261-RA through 18771 annotations produced 1 hits



Gustatory receptor 64a (Gr64a):

Annotation Number : CG32261
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045479
Gbrowse : chr3L:4026768-4028483 (+) // 100.0 //
Probeset : 1638399_at
Accessions : protein= NP_728920;, nucleotide= NM_168048;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0045479.
VDRC has 1 RNAi stocks for FBgn0045479 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 1.00None
Head1 ± 00 of 4 0.60None
Eye1 ± 00 of 4 0.46None
Thoracicoabdominal ganglion1 ± 10 of 4 0.70None
Salivary gland1 ± 00 of 4 0.64None
Crop4 ± 10 of 4 1.40None
Midgut8 ± 10 of 4 3.10None
Tubule2 ± 00 of 4 1.00None
Hindgut6 ± 00 of 4 2.10None
Heart0 ± 00 of 4 0.31None
Fat body4 ± 20 of 4 1.49None
Ovary2 ± 00 of 4 0.70None
Testis11 ± 11 of 4 4.00Up
Male accessory glands2 ± 00 of 4 0.80None
Virgin spermatheca5 ± 12 of 4 1.94None
Mated spermatheca4 ± 10 of 4 1.65None
Adult carcass3 ± 10 of 4 1.30None
Larval CNS2 ± 10 of 4 0.76None
Larval Salivary gland3 ± 10 of 4 1.17None
Larval midgut5 ± 10 of 4 2.00None
Larval tubule3 ± 10 of 4 1.30None
Larval hindgut2 ± 10 of 4 0.96None
Larval fat body7 ± 10 of 4 2.70None
Larval trachea0 ± 00 of 4 0.29None
Larval carcass2 ± 00 of 4 0.88None
S2 cells (growing)2 ± 00 of 4 0.82None
Whole fly2 ± 20 of 4

Looking for CG32261-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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