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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32274-RA through 18771 annotations produced 1 hits



drosomycin-H (Drs-l):

Annotation Number : CG32274
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052274
Gbrowse : chr3L:3335578-3335788 (-) // 100.0 //
Probeset : 1631778_at
Accessions : protein= NP_728872;, nucleotide= NM_168027;
FlyMine data for FBgn0052274.
VDRC has 4 RNAi stocks for FBgn0052274 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.80None
Head5 ± 21 of 4 1.20None
Eye6 ± 12 of 4 1.39None
Thoracicoabdominal ganglion7 ± 21 of 4 1.60None
Salivary gland20 ± 60 of 4 4.52None
Crop7 ± 20 of 4 1.50None
Midgut15 ± 00 of 4 3.50Up
Tubule6 ± 00 of 4 1.40Up
Hindgut9 ± 20 of 4 2.10None
Heart6 ± 11 of 4 1.33None
Fat body6 ± 40 of 4 1.38None
Ovary1 ± 00 of 4 0.30Down
Testis2 ± 10 of 4 0.50None
Male accessory glands8 ± 30 of 4 1.90None
Virgin spermatheca10 ± 13 of 4 2.36Up
Mated spermatheca9 ± 12 of 4 2.12Up
Adult carcass11 ± 10 of 4 2.40Up
Larval CNS4 ± 20 of 4 0.93None
Larval Salivary gland190 ± 354 of 441.39Up
Larval midgut20 ± 33 of 4 4.39Up
Larval tubule7 ± 20 of 4 1.60None
Larval hindgut5 ± 10 of 4 1.28None
Larval fat body7 ± 10 of 4 1.70None
Larval trachea10 ± 52 of 4 2.33None
Larval carcass6 ± 21 of 4 1.34None
S2 cells (growing)5 ± 10 of 4 1.22None
Whole fly4 ± 00 of 4

Looking for CG32274-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime