FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG32276-RA through 18771 annotations produced 1 hits

(CG32276):

Annotation Number : CG32276
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0047135
Gbrowse : chr3L:3197859-3199043 (-) // 100.0 //
Probeset : 1634918_a_at
Accessions : protein= NP_728830; /// NP_728831;, nucleotide= NM_167998; /// NM_167999;
Pathway : 0005783 // endoplasmic reticulum // inferred from sequence or structural similarity /// 0005840 // ribosome // inferred
FlyMine data for FBgn0047135.
BDGP gene expression has embryonic in situ data for BcDNA:RE27904: 16 pix of staining in 16 body parts.
BioGrid reports that CG32276 interacts with CG6963 CG11833 CG11893 CG13811 CG15043 CG15482 CG30011 CG3201 CG32852 CG3911 CG4209 CG4651 CG4853 CG5325 CG6703 CG6808 CG7427 .
VDRC has 1 RNAi stocks for FBgn0047135 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	891 ± 16	4 of 4	0.50	Down
Head	2358 ± 40	4 of 4	1.40	Up
Eye	1475 ± 82	4 of 4	0.86	None
Thoracicoabdominal ganglion	964 ± 19	4 of 4	0.60	Down
Salivary gland	10450 ± 102	4 of 4	6.08	Up
Crop	1572 ± 47	4 of 4	0.90	None
Midgut	3061 ± 89	4 of 4	1.80	Up
Tubule	1777 ± 121	4 of 4	1.00	None
Hindgut	1208 ± 19	4 of 4	0.70	Down
Heart	2553 ± 158	4 of 4	1.48	Up
Fat body	3284 ± 387	4 of 4	1.91	Up
Ovary	1535 ± 52	4 of 4	0.90	None
Testis	576 ± 15	4 of 4	0.30	Down
Male accessory glands	7756 ± 171	4 of 4	4.50	Up
Virgin spermatheca	4349 ± 163	4 of 4	2.53	Up
Mated spermatheca	4804 ± 332	4 of 4	2.79	Up
Adult carcass	2020 ± 116	4 of 4	1.20	None
Larval CNS	1049 ± 41	4 of 4	0.61	Down
Larval Salivary gland	7365 ± 282	4 of 4	4.28	Up
Larval midgut	3100 ± 97	4 of 4	1.80	Up
Larval tubule	1290 ± 16	4 of 4	0.70	Down
Larval hindgut	1990 ± 150	4 of 4	1.16	None
Larval fat body	6939 ± 706	4 of 4	4.00	Up
Larval trachea	3365 ± 464	4 of 4	1.96	Up
Larval carcass	2421 ± 139	4 of 4	1.41	Up
S2 cells (growing)	2669 ± 33	4 of 4	1.55	Up
Whole fly	1720 ± 120	4 of 4

Looking for CG32276-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720