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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32374-RA through 18771 annotations produced 1 hits



(CG32374):

Annotation Number : CG32374
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052374
Gbrowse : chr3L:7533368-7534268 (-) // 100.0 //
Probeset : 1626859_at
Accessions : protein= NP_729270;, nucleotide= NM_168222;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0052374.
Homophila reports that CG32374 is a close match (2e-11) to human gene IF (NP_000195), a gene associated with C3b inactivator deficiency (3).
VDRC has 1 RNAi stocks for FBgn0052374 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 1.10None
Head1 ± 00 of 4 0.50None
Eye3 ± 10 of 4 1.97None
Thoracicoabdominal ganglion1 ± 00 of 4 0.70None
Salivary gland6 ± 30 of 4 3.64None
Crop1 ± 10 of 4 1.10None
Midgut2 ± 00 of 4 1.40None
Tubule2 ± 00 of 4 1.30Up
Hindgut1 ± 10 of 4 1.10None
Heart2 ± 11 of 4 1.46None
Fat body3 ± 10 of 4 1.93None
Ovary1 ± 00 of 4 0.60None
Testis2 ± 10 of 4 1.20None
Male accessory glands7 ± 40 of 4 4.20None
Virgin spermatheca1 ± 00 of 4 0.99None
Mated spermatheca3 ± 10 of 4 2.10None
Adult carcass1 ± 00 of 4 1.10None
Larval CNS4 ± 20 of 4 2.81None
Larval Salivary gland4 ± 20 of 4 2.66None
Larval midgut0 ± 00 of 4 0.50None
Larval tubule1 ± 00 of 4 0.60None
Larval hindgut2 ± 10 of 4 1.66None
Larval fat body7 ± 10 of 4 4.00Up
Larval trachea4 ± 10 of 4 2.71Up
Larval carcass3 ± 00 of 4 2.19None
S2 cells (growing)2 ± 00 of 4 1.30None
Whole fly1 ± 00 of 4

Looking for CG32374-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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