Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32414-RA through 18771 annotations produced 1 hits



still life type 1 (sif):

Annotation Number : CG32414
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085447
Gbrowse : chr3L:5733724-5735148 (+) // 100.0 //
Probeset : 1624866_at
Accessions : protein= NP_001097516; /// NP_001097517; /// NP_001097518; /// NP_001097519; /// NP_001137892; /// NP_524647; /// NP_729084; /// NP_996000;, nucleotide= NM_001104046; /// NM_001104047; /// NM_001104048; /// NM_001104049; /// NM_001144420; /// NM_079908; /// NM_168126; /// NM_206278;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0030054 // cell junction // inferred from electronic
Interpro : 0005057 // receptor signaling protein activity // inferred from electronic annotation /// 0005085 // guanyl-nucleotide e
FlyMine data for FBgn0085447.
TRiP has 1 RNAi stocks for FBgn0085447 available for purchase.
VDRC has 4 RNAi stocks for FBgn0085447 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain15 ± 24 of 4 6.10Up
Head5 ± 31 of 4 2.00None
Eye1 ± 00 of 4 0.62None
Thoracicoabdominal ganglion10 ± 13 of 4 4.10Up
Salivary gland4 ± 21 of 4 1.69None
Crop7 ± 10 of 4 3.00Up
Midgut3 ± 10 of 4 1.50None
Tubule2 ± 00 of 4 1.10None
Hindgut8 ± 11 of 4 3.20Up
Heart4 ± 00 of 4 1.70None
Fat body11 ± 20 of 4 4.61Up
Ovary3 ± 10 of 4 1.30None
Testis3 ± 00 of 4 1.30None
Male accessory glands10 ± 20 of 4 4.30None
Virgin spermatheca3 ± 11 of 4 1.53None
Mated spermatheca5 ± 00 of 4 2.17Up
Adult carcass6 ± 10 of 4 2.40None
Larval CNS6 ± 21 of 4 2.61Up
Larval Salivary gland4 ± 11 of 4 1.78None
Larval midgut6 ± 10 of 4 2.67Up
Larval tubule6 ± 10 of 4 2.40None
Larval hindgut6 ± 10 of 4 2.59Up
Larval fat body2 ± 00 of 4 1.00None
Larval trachea5 ± 20 of 4 2.20None
Larval carcass3 ± 10 of 4 1.28None
S2 cells (growing)3 ± 10 of 4 1.25None
Whole fly2 ± 00 of 4

Looking for CG32414-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime