FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG32438-RA through 18771 annotations produced 2 hits

Smc5 (Smc5):

Annotation Number : CG32438
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052438
Gbrowse : chr3L:21562376-21566624 (+) // 100.0 //
Probeset : 1623104_at
Accessions : protein= NP_649334; /// NP_730660; /// NP_996141;, nucleotide= NM_141077; /// NM_168924; /// NM_206419;
Pathway : 0000796 // condensin complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or struc
Interpro : 0005524 // ATP binding // inferred from electronic annotation
FlyMine data for FBgn0052438.
BDGP gene expression has embryonic in situ data for Smc5: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0052438 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 1	3 of 4	1.30	None
Head	7 ± 0	3 of 4	1.20	None
Eye	27 ± 7	4 of 4	4.45	None
Thoracicoabdominal ganglion	8 ± 0	2 of 4	1.40	Up
Salivary gland	9 ± 2	0 of 4	1.48	None
Crop	4 ± 1	0 of 4	0.70	None
Midgut	1 ± 0	0 of 4	0.30	Down
Tubule	7 ± 0	1 of 4	1.20	Up
Hindgut	3 ± 0	1 of 4	0.60	Down
Heart	4 ± 0	0 of 4	0.71	None
Fat body	3 ± 2	0 of 4	0.53	None
Ovary	5 ± 0	3 of 4	0.90	None
Testis	6 ± 0	2 of 4	1.00	None
Male accessory glands	7 ± 0	0 of 4	1.10	None
Virgin spermatheca	2 ± 1	0 of 4	0.35	Down
Mated spermatheca	4 ± 1	0 of 4	0.70	None
Adult carcass	5 ± 1	0 of 4	0.80	None
Larval CNS	16 ± 2	4 of 4	2.57	Up
Larval Salivary gland	6 ± 2	0 of 4	1.08	None
Larval midgut	3 ± 1	0 of 4	0.63	None
Larval tubule	6 ± 1	0 of 4	1.00	None
Larval hindgut	6 ± 1	1 of 4	1.02	None
Larval fat body	5 ± 3	0 of 4	0.80	None
Larval trachea	6 ± 1	2 of 4	1.08	None
Larval carcass	4 ± 2	0 of 4	0.79	None
S2 cells (growing)	10 ± 0	4 of 4	1.71	Up
Whole fly	6 ± 0	2 of 4

Smc5 (Smc5):

Annotation Number : CG32438
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052438
Gbrowse : chr3L:21562376-21566624 (+) // 100.0 //
Probeset : 1623590_s_at
Accessions : protein= NP_649334; /// NP_730660; /// NP_996141;, nucleotide= NM_141077; /// NM_168924; /// NM_206419;
Pathway : 0000796 // condensin complex // non-traceable author statement /// 0005634 // nucleus // inferred from sequence or struc
Interpro : 0005524 // ATP binding // inferred from electronic annotation
FlyMine data for FBgn0052438.
BDGP gene expression has embryonic in situ data for Smc5: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0052438 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	65 ± 2	4 of 4	0.50	Down
Head	33 ± 1	4 of 4	0.30	Down
Eye	69 ± 3	4 of 4	0.57	Down
Thoracicoabdominal ganglion	56 ± 2	4 of 4	0.50	Down
Salivary gland	16 ± 0	1 of 4	0.14	Down
Crop	29 ± 1	4 of 4	0.20	Down
Midgut	21 ± 2	4 of 4	0.20	Down
Tubule	21 ± 2	4 of 4	0.20	Down
Hindgut	23 ± 2	4 of 4	0.20	Down
Heart	19 ± 1	4 of 4	0.16	Down
Fat body	9 ± 2	1 of 4	0.08	Down
Ovary	272 ± 2	4 of 4	2.20	Up
Testis	200 ± 3	4 of 4	1.60	Up
Male accessory glands	27 ± 3	4 of 4	0.20	Down
Virgin spermatheca	18 ± 0	2 of 4	0.15	Down
Mated spermatheca	17 ± 1	3 of 4	0.14	Down
Adult carcass	18 ± 2	3 of 4	0.10	Down
Larval CNS	211 ± 9	4 of 4	1.72	Up
Larval Salivary gland	22 ± 1	4 of 4	0.18	Down
Larval midgut	21 ± 2	4 of 4	0.18	Down
Larval tubule	30 ± 1	4 of 4	0.20	Down
Larval hindgut	23 ± 1	4 of 4	0.19	Down
Larval fat body	49 ± 18	4 of 4	0.40	Down
Larval trachea	69 ± 5	4 of 4	0.57	Down
Larval carcass	24 ± 3	4 of 4	0.20	Down
S2 cells (growing)	184 ± 9	4 of 4	1.50	Up
Whole fly	122 ± 9	4 of 4

Looking for CG32438-RA. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720