FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG32439-RA through 18771 annotations produced 1 hits

Rab26 (Rab26):

Annotation Number : CG32439
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086913
Gbrowse : chr3L:21320727-21321399 (+) // 100.0 //
Probeset : 1638744_at
Accessions : protein= NP_001097658; /// NP_001163488; /// NP_649303;, nucleotide= NM_001104188; /// NM_001170017; /// NM_141046;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from seq
FlyMine data for FBgn0086913.
TRiP has 1 RNAi stocks for FBgn0086913 available for purchase.
VDRC has 2 RNAi stocks for FBgn0086913 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	19 ± 1	4 of 4	34.80	Up
Head	3 ± 0	0 of 4	5.40	None
Eye	1 ± 1	0 of 4	3.18	None
Thoracicoabdominal ganglion	4 ± 0	0 of 4	7.20	Up
Salivary gland	4 ± 1	0 of 4	7.36	None
Crop	1 ± 0	0 of 4	2.70	None
Midgut	3 ± 1	0 of 4	6.50	None
Tubule	1 ± 0	0 of 4	2.80	Up
Hindgut	0 ± 0	0 of 4	1.00	None
Heart	1 ± 0	0 of 4	3.27	None
Fat body	5 ± 0	0 of 4	9.00	Up
Ovary	1 ± 0	0 of 4	2.90	None
Testis	0 ± 0	0 of 4	1.00	None
Male accessory glands	4 ± 2	0 of 4	8.60	None
Virgin spermatheca	2 ± 0	0 of 4	3.73	None
Mated spermatheca	1 ± 0	0 of 4	2.14	None
Adult carcass	3 ± 1	0 of 4	6.20	None
Larval CNS	5 ± 2	0 of 4	9.45	Up
Larval Salivary gland	1 ± 0	0 of 4	2.23	None
Larval midgut	9 ± 0	0 of 4	16.36	Up
Larval tubule	2 ± 0	0 of 4	3.70	None
Larval hindgut	0 ± 0	0 of 4	1.59	None
Larval fat body	1 ± 0	0 of 4	2.70	None
Larval trachea	1 ± 1	0 of 4	2.50	None
Larval carcass	0 ± 0	0 of 4	1.77	None
S2 cells (growing)	1 ± 0	0 of 4	2.23	None
Whole fly	0 ± 0	0 of 4

Looking for CG32439-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720