FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG32464-RD through 18771 annotations produced 2 hits

late puff gene at 82F (l(3)82Fd):

Annotation Number : CG32464
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0013576
Gbrowse : chr3R:1119686-1161626 (-) // 99.59 //
Probeset : 1632983_s_at
Accessions : protein= NP_001027148; /// NP_001027149; /// NP_001036678; /// NP_001036679; /// NP_001138006; /// NP_001138007; /// NP_001138008; /// NP_001138009; /// NP_652017; /// NP_730909; /// NP_730910; /// NP_730911; /// NP_730912; /// NP_730913; /// NP_730914; /// NP_730915; /// NP_730916; /// NP_730918; /// NP_996151;, nucleotide= NM_001031977; /// NM_001031978; /// NM_001043213; /// NM_001043214; /// NM_001144534; /// NM_001144535; /// NM_001144536; /// NM_001144537; /// NM_143760; /// NM_169038; /// NM_169039; /// NM_169045; /// NM_169047; /// NM_170640; /// NM_170641; /// NM_170642; /// NM_170643; /// NM_170644; /// NM_206429;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0013576.
BDGP gene expression has embryonic in situ data for l(3)82Fd: 36 pix of staining in 15 body parts.
TRiP has 4 RNAi stocks for FBgn0013576 available for purchase.
VDRC has 1 RNAi stocks for FBgn0013576 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	51 ± 4	4 of 4	1.50	Up
Head	16 ± 1	2 of 4	0.50	Down
Eye	12 ± 4	2 of 4	0.37	Down
Thoracicoabdominal ganglion	37 ± 3	4 of 4	1.10	None
Salivary gland	208 ± 11	4 of 4	6.02	Up
Crop	43 ± 5	4 of 4	1.20	None
Midgut	29 ± 3	4 of 4	0.90	None
Tubule	17 ± 1	1 of 4	0.50	Down
Hindgut	24 ± 0	4 of 4	0.70	Down
Heart	9 ± 1	0 of 4	0.26	Down
Fat body	12 ± 6	0 of 4	0.36	Down
Ovary	25 ± 3	4 of 4	0.70	None
Testis	9 ± 0	2 of 4	0.30	Down
Male accessory glands	29 ± 2	3 of 4	0.90	None
Virgin spermatheca	18 ± 1	0 of 4	0.53	Down
Mated spermatheca	15 ± 2	0 of 4	0.44	Down
Adult carcass	33 ± 4	4 of 4	1.00	None
Larval CNS	18 ± 2	4 of 4	0.55	Down
Larval Salivary gland	43 ± 5	4 of 4	1.26	None
Larval midgut	21 ± 1	2 of 4	0.63	Down
Larval tubule	55 ± 4	4 of 4	1.60	Up
Larval hindgut	12 ± 1	0 of 4	0.35	Down
Larval fat body	6 ± 1	0 of 4	0.20	Down
Larval trachea	17 ± 5	2 of 4	0.50	Down
Larval carcass	9 ± 2	0 of 4	0.28	Down
S2 cells (growing)	91 ± 4	4 of 4	2.64	Up
Whole fly	34 ± 2	4 of 4

late puff gene at 82F (l(3)82Fd):

Annotation Number : CG32464
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0013576
Gbrowse : chr3R:1119686-1161626 (-) // 99.59 //
Probeset : 1626842_a_at
Accessions : protein= NP_001027148; /// NP_001027149; /// NP_001036678; /// NP_001036679; /// NP_001138006; /// NP_001138007; /// NP_001138008; /// NP_001138009; /// NP_652017; /// NP_730909; /// NP_730910; /// NP_730911; /// NP_730912; /// NP_730913; /// NP_730914; /// NP_730915; /// NP_730916; /// NP_730918; /// NP_996151;, nucleotide= NM_001031977; /// NM_001031978; /// NM_001043213; /// NM_001043214; /// NM_001144534; /// NM_001144535; /// NM_001144536; /// NM_001144537; /// NM_143760; /// NM_169038; /// NM_169039; /// NM_169045; /// NM_169047; /// NM_170640; /// NM_170641; /// NM_170642; /// NM_170643; /// NM_170644; /// NM_206429;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0013576.
BDGP gene expression has embryonic in situ data for l(3)82Fd: 36 pix of staining in 15 body parts.
TRiP has 4 RNAi stocks for FBgn0013576 available for purchase.
VDRC has 1 RNAi stocks for FBgn0013576 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	245 ± 7	4 of 4	36.30	Up
Head	6 ± 0	2 of 4	0.90	None
Eye	96 ± 6	4 of 4	14.24	Up
Thoracicoabdominal ganglion	150 ± 13	4 of 4	22.20	Up
Salivary gland	435 ± 31	4 of 4	64.22	Up
Crop	47 ± 2	4 of 4	7.00	Up
Midgut	26 ± 3	4 of 4	3.90	Up
Tubule	70 ± 11	4 of 4	10.40	Up
Hindgut	10 ± 0	4 of 4	1.50	Up
Heart	29 ± 3	4 of 4	4.38	Up
Fat body	20 ± 11	3 of 4	3.09	None
Ovary	18 ± 1	4 of 4	2.80	Up
Testis	9 ± 1	4 of 4	1.40	None
Male accessory glands	8 ± 1	1 of 4	1.20	None
Virgin spermatheca	71 ± 7	4 of 4	10.53	Up
Mated spermatheca	56 ± 18	4 of 4	8.36	None
Adult carcass	13 ± 1	4 of 4	2.00	Up
Larval CNS	50 ± 6	4 of 4	7.46	Up
Larval Salivary gland	61 ± 2	4 of 4	9.06	Up
Larval midgut	17 ± 5	4 of 4	2.52	None
Larval tubule	48 ± 3	4 of 4	7.20	Up
Larval hindgut	8 ± 0	4 of 4	1.26	Up
Larval fat body	7 ± 1	1 of 4	1.20	None
Larval trachea	115 ± 29	4 of 4	17.11	Up
Larval carcass	6 ± 1	3 of 4	0.90	None
S2 cells (growing)	15 ± 1	4 of 4	2.29	Up
Whole fly	6 ± 0	3 of 4

Looking for CG32464-RD. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720