Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32484-RA through 18771 annotations produced 1 hits



Sphingosine kinase II (Sk2):

Annotation Number : CG32484
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052484
Gbrowse : chr3L:3046955-3050161 (+) // 100.0 //
Probeset : 1624594_at
Accessions : protein= NP_647762;, nucleotide= NM_139505;
Interpro : 0004143 // diacylglycerol kinase activity // inferred from electronic annotation /// 0004143 // diacylglycerol kinase ac
FlyMine data for FBgn0052484.
TRiP has 2 RNAi stocks for FBgn0052484 available for purchase.
VDRC has 2 RNAi stocks for FBgn0052484 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain163 ± 34 of 4 1.00None
Head132 ± 54 of 4 0.90None
Eye104 ± 44 of 4 0.67Down
Thoracicoabdominal ganglion137 ± 64 of 4 0.90None
Salivary gland261 ± 274 of 4 1.68Up
Crop126 ± 74 of 4 0.80Down
Midgut61 ± 44 of 4 0.40Down
Tubule236 ± 34 of 4 1.50Up
Hindgut106 ± 34 of 4 0.70Down
Heart125 ± 94 of 4 0.80Down
Fat body194 ± 124 of 4 1.24Up
Ovary256 ± 44 of 4 1.60Up
Testis123 ± 34 of 4 0.80Down
Male accessory glands262 ± 84 of 4 1.70Up
Virgin spermatheca247 ± 84 of 4 1.58Up
Mated spermatheca240 ± 94 of 4 1.54Up
Adult carcass96 ± 84 of 4 0.60Down
Larval CNS241 ± 94 of 4 1.55Up
Larval Salivary gland434 ± 154 of 4 2.79Up
Larval midgut73 ± 24 of 4 0.47Down
Larval tubule379 ± 34 of 4 2.40Up
Larval hindgut268 ± 84 of 4 1.72Up
Larval fat body208 ± 124 of 4 1.30Up
Larval trachea221 ± 144 of 4 1.42Up
Larval carcass194 ± 84 of 4 1.25Up
S2 cells (growing)267 ± 24 of 4 1.72Up
Whole fly156 ± 84 of 4

Looking for CG32484-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime