Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32578-RA through 18771 annotations produced 1 hits



Gpi1 (Gpi1):

Annotation Number : CG32578
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086448
Gbrowse : chrX:16253372-16255308 (+) // 100.0 //
Probeset : 1638256_at
Accessions : protein= NP_652730;, nucleotide= NM_144473;
Pathway : 0005789 // endoplasmic reticulum membrane // inferred from sequence or structural similarity /// 0016021 // integral to
Interpro : "0016740 // transferase activity // inferred from electronic annotation /// 0016757 // transferase activity
FlyMine data for FBgn0086448.
VDRC has 1 RNAi stocks for FBgn0086448 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain85 ± 24 of 4 1.30Up
Head51 ± 34 of 4 0.80Down
Eye57 ± 34 of 4 0.87None
Thoracicoabdominal ganglion98 ± 54 of 4 1.50Up
Salivary gland48 ± 44 of 4 0.73Down
Crop54 ± 64 of 4 0.80None
Midgut41 ± 24 of 4 0.60Down
Tubule83 ± 34 of 4 1.30Up
Hindgut39 ± 14 of 4 0.60Down
Heart64 ± 64 of 4 0.98None
Fat body29 ± 24 of 4 0.45Down
Ovary152 ± 34 of 4 2.30Up
Testis28 ± 24 of 4 0.40Down
Male accessory glands83 ± 34 of 4 1.30Up
Virgin spermatheca46 ± 34 of 4 0.70Down
Mated spermatheca54 ± 74 of 4 0.82None
Adult carcass27 ± 24 of 4 0.40Down
Larval CNS143 ± 74 of 4 2.16Up
Larval Salivary gland97 ± 44 of 4 1.48Up
Larval midgut29 ± 04 of 4 0.45Down
Larval tubule107 ± 14 of 4 1.60Up
Larval hindgut47 ± 14 of 4 0.71Down
Larval fat body78 ± 74 of 4 1.20None
Larval trachea67 ± 104 of 4 1.02None
Larval carcass40 ± 34 of 4 0.61Down
S2 cells (growing)77 ± 34 of 4 1.18None
Whole fly66 ± 24 of 4

Looking for CG32578-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime