FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3269-RA through 18771 annotations produced 1 hits

Rab-protein 2 (Rab2):

Annotation Number : CG3269
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014009
Gbrowse : chr2R:2584226-2587441 (+) // 100.0 //
Probeset : 1636607_at
Accessions : protein= NP_477090;, nucleotide= NM_057742;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from seq
FlyMine data for FBgn0014009.
BDGP gene expression has embryonic in situ data for Rab2: 12 pix of staining in 12 body parts.
Homophila reports that CG3269 is a close match (8e-12) to human gene RRAS2;TC21 (NP_001096139), a gene associated with Ovarian carcinoma (3).
BioGrid reports that CG3269 interacts with CG5337 .
TRiP has 2 RNAi stocks for FBgn0014009 available for purchase.
VDRC has 3 RNAi stocks for FBgn0014009 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	70 ± 4	4 of 4	1.50	Up
Head	72 ± 8	4 of 4	1.50	None
Eye	50 ± 3	4 of 4	1.06	None
Thoracicoabdominal ganglion	129 ± 12	4 of 4	2.70	Up
Salivary gland	64 ± 8	4 of 4	1.36	None
Crop	211 ± 23	4 of 4	4.50	Up
Midgut	86 ± 2	4 of 4	1.80	Up
Tubule	101 ± 4	4 of 4	2.10	Up
Hindgut	95 ± 5	4 of 4	2.00	Up
Heart	179 ± 19	4 of 4	3.78	Up
Fat body	332 ± 30	4 of 4	6.99	Up
Ovary	30 ± 2	4 of 4	0.60	None
Testis	8 ± 1	4 of 4	0.20	Down
Male accessory glands	59 ± 8	4 of 4	1.30	None
Virgin spermatheca	150 ± 12	4 of 4	3.16	Up
Mated spermatheca	158 ± 12	4 of 4	3.33	Up
Adult carcass	144 ± 11	4 of 4	3.00	Up
Larval CNS	58 ± 4	4 of 4	1.24	None
Larval Salivary gland	43 ± 3	4 of 4	0.90	None
Larval midgut	61 ± 8	4 of 4	1.29	None
Larval tubule	202 ± 4	4 of 4	4.30	Up
Larval hindgut	61 ± 2	4 of 4	1.29	None
Larval fat body	93 ± 9	4 of 4	2.00	Up
Larval trachea	35 ± 6	4 of 4	0.76	None
Larval carcass	53 ± 4	4 of 4	1.12	None
S2 cells (growing)	29 ± 3	4 of 4	0.62	Down
Whole fly	47 ± 5	4 of 4

Looking for CG3269-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720