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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG32702-RA through 18771 annotations produced 1 hits



/// (CG32702 /// DsimCG32702):

Annotation Number : CG32702
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052702
Gbrowse : chrX:9452697-9465181 (-) // 100.0 //
Probeset : 1641037_at
Accessions : protein= NP_727348;, nucleotide= NM_167193;
Interpro : 0005509 // calcium ion binding // inferred from electronic annotation
FlyMine data for FBgn0052702.
Homophila reports that CG32702 is a close match (3e-11) to human gene MASP2 (NP_006601), a gene associated with MASP2 deficiency (3).
TRiP has 1 RNAi stocks for FBgn0052702 available for purchase.
VDRC has 2 RNAi stocks for FBgn0052702 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain42 ± 14 of 4 2.50Up
Head20 ± 14 of 4 1.20None
Eye26 ± 14 of 4 1.53Up
Thoracicoabdominal ganglion46 ± 34 of 4 2.70Up
Salivary gland71 ± 44 of 4 4.19Up
Crop22 ± 14 of 4 1.30Up
Midgut70 ± 64 of 4 4.10Up
Tubule36 ± 24 of 4 2.10Up
Hindgut41 ± 14 of 4 2.40Up
Heart2320 ± 1064 of 4135.29Up
Fat body90 ± 344 of 4 5.26Up
Ovary13 ± 14 of 4 0.80None
Testis8 ± 04 of 4 0.50Down
Male accessory glands36 ± 34 of 4 2.10Up
Virgin spermatheca31 ± 14 of 4 1.81Up
Mated spermatheca23 ± 34 of 4 1.35None
Adult carcass145 ± 134 of 4 8.50Up
Larval CNS31 ± 24 of 4 1.81Up
Larval Salivary gland70 ± 54 of 4 4.13Up
Larval midgut108 ± 94 of 4 6.32Up
Larval tubule137 ± 84 of 4 8.00Up
Larval hindgut21 ± 14 of 4 1.25None
Larval fat body56 ± 44 of 4 3.30Up
Larval trachea29 ± 353 of 4 1.72None
Larval carcass142 ± 154 of 4 8.33Up
S2 cells (growing)97 ± 64 of 4 5.68Up
Whole fly17 ± 14 of 4

Looking for CG32702-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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